Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1035 a.a., acriflavine resistance protein B from Magnetospirillum magneticum AMB-1

 Score =  603 bits (1555), Expect = e-176
 Identities = 370/1039 (35%), Positives = 582/1039 (56%), Gaps = 24/1039 (2%)

Query: 5    DVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQIT 64
            D+ +KRPV A V+S+L+   G+ +   L VR+ P++ + V++++T + GA A +I+  +T
Sbjct: 3    DIFIKRPVLAAVVSLLILFIGLRALMSLPVRQYPEMTNTVITITTTFPGADADMIQGFVT 62

Query: 65   SVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEAD 124
              ++  +A   GI+ +TS S  G+S +     L  D  T ++ +   VA  +  LP+  +
Sbjct: 63   QPIQKAVATAEGINYLTSRSIQGVSEVKAFIRLNDDPETAMTGVMSKVAEVKSLLPKGIN 122

Query: 125  DPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYKVM 184
            D  + K  G   AS Y+  SS  + + Q+TDY+ RV+  + + + GV++ ++ GG    M
Sbjct: 123  DSIIKKETGQSFASAYLAFSSDRLSQQQITDYVMRVVQPKLAAVPGVANPELYGGQKFSM 182

Query: 185  YVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDFEYLV 244
             V + PE +A  G+   D+  AL   N  S  G  +    V++ + +   +S E+F  LV
Sbjct: 183  RVWLDPEKLAQHGMGPDDLKTALTSNNFTSASGSTKGAYDVVNTQASTDLKSVEEFRQLV 242

Query: 245  VKRASDGTPIY-LKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVHE- 302
            +K   DG+ +  L DVA V +G EN++ +  +     + +GI    +ANPL V + V E 
Sbjct: 243  IKH--DGSRLVRLGDVAGVELGPENDDMSVFAGDERAIFVGIYTTPEANPLSVIREVREV 300

Query: 303  EVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATLIP 362
             +  +Q  LP G    I YDST+FI+ +I+EV  T+     +V++V++ F+G +R+ +IP
Sbjct: 301  ALPALQAQLPPGLTAKIAYDSTLFIDAAITEVAKTIAEAAIIVMVVIFFFMGSVRSVVIP 360

Query: 363  AVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKPLL 422
             VTVP+SLI   +     GFSINL+TL+A++L+IGLVVDDAIVVVEN+  HIE G  P  
Sbjct: 361  VVTVPLSLIGVAVLLLSLGFSINLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGLTPFR 420

Query: 423  AAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALTLT 482
            AA  GTRE+   VI+ T+ L  V+ PI+FM G+ G LF EF++ LA +V+ S +IALTL+
Sbjct: 421  AALVGTREIAGPVISMTITLAAVYAPIAFMGGLTGSLFKEFALTLAGSVVVSGIIALTLS 480

Query: 483  PVLGSKLLKANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACIGGSYGL 542
            P++ SK+LK +        LIDR F R+ + Y   ++ ++  R    +     +G    L
Sbjct: 481  PMMCSKILKHDDDKKGLTALIDRTFDRVRAKYEVWLAASLADRPTTLIFAMIVLGSLPFL 540

Query: 543  MQLVPAQLTPSEDRGVIFSFVRGADATSYNRMA-ANMDLVEQRLMPLLGQGFLKSFSIQS 601
               VP +L P ED+GV+F        T+YN  A AN D +E     +  +  LK+F   +
Sbjct: 541  FLAVPTELAPEEDQGVVF--------TAYNGPASANTDFMEAFSHQISAK--LKAFPETN 590

Query: 602  PAF--GGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVR--VFPFMPGFRG 657
              F   G      GF   +L  W DR ++A+   + +++AL  +  V+  VFP  P   G
Sbjct: 591  ETFLINGMGAISQGFGGAVLTPWEDRKLSAKALTAAIQQALNEVSGVKASVFP-PPPLPG 649

Query: 658  GSNEPVQFVLGG-SDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRAA 716
                PVQFVL    DY +L     ++ + A+ S      D D   ++P+  V ID+ +AA
Sbjct: 650  VDGLPVQFVLSSIVDYQQLNEIQGEVMKRAQASGMFAFIDADLKIESPQTQVVIDRDKAA 709

Query: 717  ELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRTATGE 776
              GIS++ I D L  M GG  V     +G  Y V  +       + A L + ++R+++G 
Sbjct: 710  AYGISMQQIGDALGTMTGGNYVNLVNLQGRSYQVIPQVPREFRLDPAQLGRYHVRSSSGG 769

Query: 777  LVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEILPNDIS 836
             V L ++  +      + L  +N+  SVTI A    G TLGQAL+ L   AQE+LP   +
Sbjct: 770  AVPLSSLVSLGSSVRPVSLNQFNQLNSVTIQAFPMPGVTLGQALELLRSIAQEVLPQGTT 829

Query: 837  VSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFLGL 896
            V Y+G+S+ + +  +++A+ F  AL++ +LVL+AQFESF +PLV+M++VP+ + G  + L
Sbjct: 830  VDYAGQSRQYVQEGNALAMTFVFALIIIFLVLSAQFESFRDPLVIMVSVPLSICGALIPL 889

Query: 897  FVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRD-RGVEFEKAIIDASARRLRPIL 955
             +    MNIY+Q+G++ LIG++TK+GILI E A + ++  G++  +A++ A+  RLRPIL
Sbjct: 890  ALGVASMNIYTQVGLVTLIGLITKHGILICEVARERQEAEGLDRAQAVMVAAGLRLRPIL 949

Query: 956  MTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRLISGSTQAP 1015
            MT    +AG IPL+ + GAG  SR ++  VI  GM   T  TL V+P +Y  +  + Q  
Sbjct: 950  MTTAAMVAGLIPLLFAHGAGAASRFSIAVVIVAGMSIGTAFTLFVLPVIYTFV--AAQRR 1007

Query: 1016 GHVEAELNHELQQDVKGRA 1034
            G  EA         V G A
Sbjct: 1008 GVSEAAQERHAHGHVAGPA 1026