Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1042 a.a., The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  505 bits (1301), Expect = e-147
 Identities = 309/1022 (30%), Positives = 545/1022 (53%), Gaps = 31/1022 (3%)

Query: 15   LVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITSVLEDQLAGI 74
            +V+S+   + G ++F  L V   PDI  P VS+  +Y+GA++ ++   +T+ LE  + G+
Sbjct: 1    MVISLFFVLLGALTFFSLPVALFPDIAPPAVSIRAKYRGANSEVVAKTVTTPLEKAINGV 60

Query: 75   SGIDEITSVSRN-GMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEADDPQVFKNNG 133
             G+  ++SVS N G S+I V F      +    ++++ V+     LP++     V     
Sbjct: 61   PGMMYMSSVSSNRGTSKIKVYFGAETSPDEAAMEVQNRVSTVVNDLPQDVIKAGVTVEKE 120

Query: 134  SGQASVYINLSSSE--MDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYKVMYVRIKPE 191
                 +YIN+  S+  MD   + ++ +  +L     + GV   ++       M + +KP+
Sbjct: 121  VEGLLLYINVMGSDPSMDEQFIYNFSDLNVLQELRRVDGVGFAEIMSTKDYSMRIWLKPD 180

Query: 192  LMAGRGVATSDISDALNKENLESPGGQVRNDS------TVMSVRTARGYQSAEDFEYLVV 245
             M    V+T ++  ALN +N+E+  GQV   S          +R +  +  A+++E LV+
Sbjct: 181  RMTAYQVSTDEVKAALNNQNVEAAPGQVGVSSGKGAQMIQYGLRYSGKFNEAKEYENLVI 240

Query: 246  KRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVHEEVD 305
            +   DG+ + L D+ADV  G+ N     K+DG    S+ I+ +  +N  +V +RV + ++
Sbjct: 241  RANKDGSILRLGDIADVEFGSLNYGRISKTDGKPAASIMIIQRPGSNARDVIQRVKKRME 300

Query: 306  KVQQ-FLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATLIPAV 364
            +++Q   P G    I YD + F++ SI EV  TL     LV LV++IF+   R+TLIPA+
Sbjct: 301  ELKQGSFPPGVDYKITYDVSRFLDASIHEVLKTLIEAFILVFLVVFIFLQDFRSTLIPAL 360

Query: 365  TVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGE-KPLLA 423
             VPV+LI        FGFSIN++TL AL+L+IG+VVD+AIVVVE +   +E     P+ A
Sbjct: 361  AVPVALIGTLFFMQLFGFSINMLTLFALVLAIGIVVDNAIVVVEAVHAKMEEDHLPPMEA 420

Query: 424  AYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALTLTP 483
                 +++G A+++ TLV+  VF+P++F+DG VG+ + +FS+ LA+A++ S + ALTLTP
Sbjct: 421  TLAAMKDIGGAIVSITLVMSAVFIPVAFLDGPVGIFYRQFSITLAIAIVISGINALTLTP 480

Query: 484  VLGSKLLKANVKPGRFNQLID-------RLFARLESGYRQVVSRAIRWRWAAPVVIAACI 536
             L + +LK +    +   L++       R +      YR  +   +  R    +++ A  
Sbjct: 481  ALCAIILKNHYGTEQKKTLLNTFFNGFNRAYESFSGKYRNTLGVLVGRRLVTVIMLVAFF 540

Query: 537  GGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQ---RLMPLLGQGF 593
             G++G+ +++P+   P ED+ +++  V      +  R    +D ++Q    L  +     
Sbjct: 541  IGTWGVAKVLPSGFIPVEDQSMVYINVVSPSGATVERTEKVLDHIQQAAEELDEVAAVST 600

Query: 594  LKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPFMP 653
            L  +S+ +    G +G   G  ++ L++W++R  + QE + ++    A I D +V  F+P
Sbjct: 601  LAGYSLST----GLSGASYGMGMINLKNWDEREASIQETIDELYARTADISDAQVQFFLP 656

Query: 654  ----GFRGGSNEPVQFV--LGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELV 707
                GF   S   ++ +   G  +  +L    E   E  + +P +     D+    P+ +
Sbjct: 657  PTVSGFGNSSGFQMKVLDQTGSGNLQKLSLVIEDFVEALDNAPEIGEVKSDFDPNFPQYM 716

Query: 708  VTIDKQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQ 767
            V +D+  AA+ G+++ +   TL++++GG   + FV     YDV ++       N  D+ +
Sbjct: 717  VNVDQDMAAKKGVTISNAMSTLQILMGGVLASDFVRFENMYDVMMQAGPQYRANPEDVLK 776

Query: 768  IYMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKA 827
            ++++   GE+V + +   +++V    +L+ +N   S  +      GY+ G A+  + + A
Sbjct: 777  VHVKNDGGEMVPISSFINLEKVYGPEQLSKHNMYTSAKVKGIPAPGYSSGDAVAAIQRVA 836

Query: 828  QEILPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPM 887
             E LP      + G ++    + +    +F + L+  YL+LAAQ+ESF+ PL V+L +P 
Sbjct: 837  AEKLPKGYGYDWYGMTRQEVSSGNQAIYIFIICLVFVYLLLAAQYESFVLPLPVILFLPA 896

Query: 888  GVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAIIDAS 947
            GVFG F  L+++G   NIY+Q+ +IMLIG++ KN ILI+EFA   R  G++   A I  +
Sbjct: 897  GVFGSFAALYLLGLQNNIYAQVALIMLIGLLGKNAILIIEFAVLKRKEGMDIIPAAITGA 956

Query: 948  ARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRL 1007
              RLRPILMT+F  +AG +PL ++TGAG     ++GT    GM   T+  + +IP +Y L
Sbjct: 957  VSRLRPILMTSFAFMAGLVPLCMATGAGALGNRSIGTAALGGMFSGTVFGMFLIPGLYVL 1016

Query: 1008 IS 1009
             S
Sbjct: 1017 FS 1018