Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1020 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  730 bits (1884), Expect = 0.0
 Identities = 391/1015 (38%), Positives = 611/1015 (60%), Gaps = 9/1015 (0%)

Query: 3    LSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQ 62
            LS VS++RPV A+V S+ + +FG++  T L VRE P ++ P+++V T Y GA+A +IE+Q
Sbjct: 4    LSTVSIRRPVLAIVFSLTILLFGIIGMTFLGVREYPSVDPPIINVRTTYVGANADVIEAQ 63

Query: 63   ITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEE 122
            IT  LE+ + GISGI  +TS S +G S ITV F++G D+    +D+RD V+RAQR+LP +
Sbjct: 64   ITEPLEESINGISGIKSLTSTSNDGTSNITVEFDVGADMEAAANDVRDKVSRAQRNLPPD 123

Query: 123  ADDPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYK 182
            A+ P V K +   +  V++N+ S +    QL+D  + +  +R   I GVS V + G    
Sbjct: 124  AEPPVVSKADADSEPIVFLNVKSEQKSLLQLSDIADNIFKERLQTIPGVSEVRIWGEKEY 183

Query: 183  VMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDFEY 242
             M +R+ P  MA  GV   D+   +  EN+E P G++   +  +SVRT     + ++F  
Sbjct: 184  AMRLRMDPIRMASYGVTPLDVLTKVQSENVELPSGRIEGSTIELSVRTKSRLSTPDEFNN 243

Query: 243  LVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVHE 302
            L++K  S+   +  +DV +  +   NE +  K DG+  V + +VP   +N +++    + 
Sbjct: 244  LIIKE-SENNIVRFQDVGNAELAPLNERTVLKRDGVPMVGVVLVPLPGSNSIDIVDEFYR 302

Query: 303  EVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATLIP 362
             ++ +++ LP+   L I +DST +I  SISEV  T+ +   LV+ ++++F+   R T IP
Sbjct: 303  RLEFIKKDLPEDIELGIGFDSTEYIRNSISEVQETILLAFLLVVAIIFLFLRDWRTTFIP 362

Query: 363  AVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKPLL 422
             +T+P+SL+  F   Y   FSIN++TL+ ++LSIGLVVDDAIVV+ENI+  IE+GE+P  
Sbjct: 363  VITIPISLVGVFFIMYTMDFSINVLTLLGIVLSIGLVVDDAIVVLENIYSKIEKGEQPEA 422

Query: 423  AAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALTLT 482
            AA KG  E+ FAVIATT+ L  VFLP+ F+ G  G LF EF V++A +VI SS +ALT+T
Sbjct: 423  AAEKGAEEIFFAVIATTIALAAVFLPVIFLTGTTGRLFREFGVVVAGSVIISSFVALTMT 482

Query: 483  PVLGSKLLKANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACIGGSYGL 542
            P+L SKLLK   K   F  + +  F  L   Y   +   +++RW + ++I A  GG Y L
Sbjct: 483  PMLSSKLLKKREKHNWFYNVTEPGFLWLNKKYEAALVWFMQFRWVSFIIILAMGGGIYLL 542

Query: 543  MQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKSF-SIQS 601
               +P++L P+EDRG +   + G +  ++  M   +D +   +M  +      SF S+ S
Sbjct: 543  FNTIPSELAPTEDRGEMRINMSGPEGATFEYMDRVIDELLYEMMTTIPSDVWDSFISVTS 602

Query: 602  PAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPFMPGF----RG 657
            P FG  A   +GF+ + L D + RTV+ Q     V + L    DV+ F   P      RG
Sbjct: 603  PGFG-TASTNSGFIRVRLVDASQRTVSQQAVFEDVAEILRKKTDVKAFASQPQSIGDRRG 661

Query: 658  GSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRAAE 717
            G   P+Q+VL   +  +LK       +E  +SP    +DI+     PE+ V ID+++A  
Sbjct: 662  GM--PIQYVLQAQNLEKLKEVIPAFMDEVTQSPIFQFSDINLKFTKPEIEVEIDREKARN 719

Query: 718  LGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRTATGEL 777
            +G+SV+ I+ TL++   G++   F+  G++Y V     +   N   +L  +Y+R   G+L
Sbjct: 720  IGVSVQEIARTLQLSYSGQRFDYFIMNGKQYQVVGEMQKEDRNEPINLRMLYVRAENGQL 779

Query: 778  VTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEILPNDISV 837
            V LD +  I E ++  +L  +N+  S T++A L   YT+G  LD +D+ A E+L    + 
Sbjct: 780  VQLDNLVNITEKSTPPQLYRFNRFVSATVSAGLAPKYTIGDGLDEMDRIAAEVLDESFTT 839

Query: 838  SYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFLGLF 897
              +G SK+F+E+ +S+   F  AL++ YLVL+AQFESF +PL +M+TVP+ +FG  L L+
Sbjct: 840  DVAGVSKEFRESSNSLIFAFLFALILIYLVLSAQFESFTDPLTIMITVPLALFGALLSLW 899

Query: 898  VMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAIIDASARRLRPILMT 957
            + G  +NI+SQIG+IMLIG+VTKNGILIVEFANQ +  G+E ++AII A+  R RPILMT
Sbjct: 900  LGGYTLNIFSQIGIIMLIGLVTKNGILIVEFANQRKAHGLEVDEAIIGAAVARFRPILMT 959

Query: 958  AFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRLISGST 1012
            + +T+ G +P+ ++ GAG ESR  +G  +  G+  +T++TL VIP +Y  ++  +
Sbjct: 960  SLSTILGILPIALALGAGAESRSPMGVAVIGGLVLSTILTLFVIPGVYTYLTSKS 1014