Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1010 a.a., RND transporter, HAE1 family from Bacteroides ovatus ATCC 8483

 Score =  689 bits (1778), Expect = 0.0
 Identities = 382/1013 (37%), Positives = 609/1013 (60%), Gaps = 16/1013 (1%)

Query: 1    MWLSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIE 60
            M +S++S++RPV A VL++++ +FG + +  L VRE P +++P++SVS  Y GA+A +IE
Sbjct: 1    MNISELSIRRPVLATVLTIIILLFGFIGYNYLGVREYPSVDNPIISVSCSYPGANADVIE 60

Query: 61   SQITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLP 120
            +QIT  LE  + GI GI  ++SVS+ G SRITV FEL  DL T  +D+RD V+RAQR LP
Sbjct: 61   NQITEPLEQNINGIPGIRSLSSVSQQGQSRITVEFELSVDLETAANDVRDKVSRAQRYLP 120

Query: 121  EEADDPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGL 180
             + D P V K +      + + L S +    +L++  +  + ++   IS VSSV + G  
Sbjct: 121  RDCDPPTVSKADADAMPILMVALQSDKRSLLELSEIADLTVKEQLQTISDVSSVSIWGEK 180

Query: 181  YKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDF 240
               M + + P  MAG G+   D+ +A++ EN+E P G +  ++T +++RT     +A++F
Sbjct: 181  RYSMRLWLDPVKMAGYGITPVDVKNAVDNENVELPSGSIEGNTTELTIRTLGLMHTADEF 240

Query: 241  EYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRV 300
              L+VK  ++   +   D+    +G  +  S  K +G+  V + ++PQ  AN +E+A  V
Sbjct: 241  NDLIVKEENNRI-VRFSDIGRAELGPADIKSYMKMNGVPMVGVVVIPQPGANHIEIADAV 299

Query: 301  HEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATL 360
            ++ ++++++ LP+       +D+T FI  SI+EV ST++    LVI+++++F+   R TL
Sbjct: 300  YQRMEQMKKDLPEDVHYNYGFDNTKFIRASINEVKSTVYEAFVLVIIIIFLFLRDWRVTL 359

Query: 361  IPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKP 420
            +P + +PVSLI AF   Y  GFSIN+++++A++LS+GLVVDDAIV+ ENI+  IE+G  P
Sbjct: 360  VPCIVIPVSLIGAFFVMYLAGFSINVLSMLAIVLSVGLVVDDAIVMTENIYIRIEKGMAP 419

Query: 421  LLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALT 480
              A  +G +E+ FAVI+TT+ LV VF PI FMDGM G LF EFS++++ +VI SS  ALT
Sbjct: 420  KEAGIEGAKEIFFAVISTTITLVAVFFPIVFMDGMTGRLFREFSIVISGSVIISSFAALT 479

Query: 481  LTPVLGSKLLKANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAP--VVIAACIGG 538
             TP+L +KLL    K   F    +  F  +   Y + ++  +  RW A     I  C+ G
Sbjct: 480  FTPMLATKLLIKREKQSWFYAKTEPFFEGMNRLYSRSLAAFLSKRWIALPFTFITICLIG 539

Query: 539  SYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKSFS 598
               L   VPA++ P EDR  I    RGA+  +Y  +    + + Q +  +L         
Sbjct: 540  I--LWNAVPAEMAPLEDRSQISINTRGAEGVTYEYIRDYTEDINQLVDSILPD------- 590

Query: 599  IQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPFMPGFRGG 658
              + A        +G V + L+D N+R  T  +   ++ KA+      R F       GG
Sbjct: 591  --AEAVTARVSSGSGNVRITLKDMNERNYTQMDVAEKISKAVQKKTMARSFVQQQSSFGG 648

Query: 659  --SNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRAA 716
               + PVQ+VL  ++  +L+    K   +  ++P    AD+D     PE  + I++ +A+
Sbjct: 649  RRGSMPVQYVLQATNLEKLEEVLPKFMAKVYENPVFQMADVDLKFSKPEARIQINRDKAS 708

Query: 717  ELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRTATGE 776
             +G+S K+I+ TL+  L G+++  F   G++Y++    +    N  ADL  IY+R+++G+
Sbjct: 709  IMGVSTKNIAQTLQYGLSGQRMGYFYMNGKQYEILGEINRQQRNKPADLKAIYVRSSSGD 768

Query: 777  LVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEILPNDIS 836
            ++ LD +  ++   +  +L  YN+  S TI+A L  G T+GQ LD +D+ A+E L +   
Sbjct: 769  MIQLDNLIELESGIAPPKLYRYNRFVSATISAGLADGKTIGQGLDEMDKIAKETLDDTFR 828

Query: 837  VSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFLGL 896
             + SG+SK+++E+ SS+   F LA+L+ YL+LAAQFESF +PL++MLTVP+ + G  + +
Sbjct: 829  TALSGDSKEYRESSSSLMFAFILAILLIYLILAAQFESFKDPLIIMLTVPLAIAGALVFM 888

Query: 897  FVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAIIDASARRLRPILM 956
            +     MNI+SQIG+IMLIG+V KNGILIVEFANQ ++ G +   AI DA+ +RLRPILM
Sbjct: 889  YFGDITMNIFSQIGIIMLIGLVAKNGILIVEFANQKQEAGEDKMSAIKDAALQRLRPILM 948

Query: 957  TAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRLIS 1009
            T+ +T+ G IPL  +TG G   RIA+GT +  GM  +TL+T+ ++PA+Y  IS
Sbjct: 949  TSASTVLGLIPLAFATGEGCNQRIAMGTAVVGGMVVSTLLTMYIVPAIYSYIS 1001