Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1034 a.a., Multidrug resistance protein MdtC from Acinetobacter radioresistens SK82

 Score =  513 bits (1322), Expect = e-149
 Identities = 309/1026 (30%), Positives = 545/1026 (53%), Gaps = 32/1026 (3%)

Query: 1    MWLSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIE 60
            MW + +SVK PV  +++ + L V G+ S+ ++ V E PD++ P V V T Y GAS   +E
Sbjct: 1    MWFTRISVKYPVFTIMMMLCLMVLGLASWQRMGVEEYPDVDFPFVVVYTSYPGASPETVE 60

Query: 61   SQITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLP 120
            S+IT  +EDQ+  ISG+ ++TS S  G+S I   F+L    +    D+RD +A       
Sbjct: 61   SEITKKMEDQINTISGLKKLTSTSSEGLSTIVAEFDLDISSSVAAQDVRDKIASVTAQFR 120

Query: 121  EEADDPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGL 180
            +E +DP V + + +  A + +   S+ M    L+ Y+++ +L +   + GV +V++ G  
Sbjct: 121  DEIEDPVVERYDPTSSAIMSLVFESNNMSLKDLSSYLDQRILPQLRTVEGVGNVNLLGDA 180

Query: 181  YKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDF 240
             + + + + P+ +   GV    + + L  EN++ PGG ++   + + V       +   F
Sbjct: 181  QRQIRIAVDPKKLRSFGVGIDQVINTLKNENVQIPGGALQQPDSELVVEIQAKVLNPYQF 240

Query: 241  EYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRV 300
              L++     GTP+YLK VA +        +    +G   V++ I+  +DAN ++V K  
Sbjct: 241  GELIIAN-KQGTPVYLKQVATITDSQAEMETAAYLNGKSAVAIDILRSADANIVDVVKNA 299

Query: 301  HEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATL 360
            ++ +D+++Q LP GT L +  D++  I+ +I +V  T+     L I+++ +F+G  R+T+
Sbjct: 300  YQVIDRIEQQLPAGTTLKVVVDNSESIQSTIKDVARTIVEGAVLAIIIVLLFLGSFRSTV 359

Query: 361  IPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKP 420
            I  +T+P++L+      + FGF+IN++TL+AL LSIGL++DDAIVV ENI  H + G+  
Sbjct: 360  ITGLTLPIALLGTLTFIWAFGFTINMMTLLALSLSIGLLIDDAIVVRENIVRHSDMGKDH 419

Query: 421  LLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALT 480
            + AA  GT+E+G AV+ATTL +V VFLP++FM G++G  F +F V ++ AV+ S  ++ T
Sbjct: 420  VTAALDGTKEIGLAVLATTLTIVAVFLPVAFMGGIIGRFFYQFGVTVSTAVLISMFVSFT 479

Query: 481  LTPVLGSKLLKANVKPGRFNQLIDRLFA-------RLESGYRQVVSRAIRWRWAAPVVIA 533
            L P+L +   +   +P + N L  R FA        L + Y +++  A+R+R    ++  
Sbjct: 480  LDPMLSAHWAERKDRPKKQNTL-TRFFAWTSKKLDDLTAVYEKLLRLALRFRLLTVLIAV 538

Query: 534  ACIGGSYGLMQLVPAQLTPSEDRGVI-FSFVRGADAT---SYNRMAANMDLVEQRLMPLL 589
              + G++ L +L+  +  P+ D+G I   F    DA+   +  ++    +++ Q      
Sbjct: 539  LSLFGAFALSKLIGTEFVPTPDKGSIRVKFETPVDASLQYTQAKLQQVENIIRQHPEVQT 598

Query: 590  GQGFLKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVF 649
              G +   +        + G   G + + +   ++R  T  +  + +R  L  +  + + 
Sbjct: 599  TYGVINGMT--------DRGKNHGSIRVTVTPRHEREQTLNDLNNDLRNRLQQVGGITIT 650

Query: 650  PFMPGFR--GGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELV 707
                      G  +P+Q  + G D  EL+  +++   E +K   +   +    E  P L 
Sbjct: 651  SVASADEVVSGGRKPIQISIKGPDLDELQRISDRFMAEMKKINGVVDLETSLKEPKPTLS 710

Query: 708  VTIDKQRAAELGISVKSISDTLEVMLGGKKVTTFV-ERGEEYDVYLRGDENSFNNAADLS 766
            V+I++  A++LG+SV  I++ +  ++ G  VTT+  ERGE YDV LR  EN+    +D+ 
Sbjct: 711  VSINRVLASDLGLSVNQIANVVRPLIAGDNVTTWEDERGENYDVNLRLSENARTLPSDIQ 770

Query: 767  QIYMRTATGE------LVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQAL 820
             +Y+ +   +      LV L TV    E + A ++      + V I AN  +G   G   
Sbjct: 771  NMYITSEKLDNNNQNILVPLATVASFKETSGASQINRRELSREVLIEAN-TSGRPAGDIG 829

Query: 821  DFLD-QKAQEILPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPL 879
              +D  +AQ  LP   S    G + D  E+         L+++  Y+VL +QF SFI+P 
Sbjct: 830  GDIDAMQAQFKLPPGYSFDTEGANADMAESLGYAITAITLSIVFIYIVLGSQFNSFIHPA 889

Query: 880  VVMLTVPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEF 939
             +M ++P+ + G FL L++    MN++S IG+IML+G+VTKN IL+++F  +  + G++ 
Sbjct: 890  AIMASLPLSLIGVFLALYLFNSTMNLFSIIGIIMLMGLVTKNAILLIDFIKKGIESGMDR 949

Query: 940  EKAIIDASARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLL 999
              AI+ A   RLRPILMT    + G +PL +  G   E    +   +  G+  +TL+TL+
Sbjct: 950  YDAIVAAGTTRLRPILMTTSAMVMGMVPLALGLGESGEQSSPMAHAVIGGVITSTLLTLV 1009

Query: 1000 VIPAMY 1005
            V+P ++
Sbjct: 1010 VVPIIF 1015