Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (348), Expect = 2e-37
 Identities = 93/351 (26%), Positives = 171/351 (48%), Gaps = 14/351 (3%)

Query: 1   MNKNTVLSLTLLTLLMNSAV---------LSAKEPNQP-PAISVVTESVQSQQISQSLSV 50
           M K T   L +  LL  S +         ++    N+P P   V   +         +  
Sbjct: 1   MKKWTFFMLLIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVIEA 60

Query: 51  VGKLKAEQSVDIAAEVAGKVDMIAVQANQQVKKGQILIKLDDDKAQAALVEAKAYLQDEQ 110
           +G ++  Q V +  E AG +D I  ++  QV K Q L+ LD    +A L   +A L   +
Sbjct: 61  IGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAK 120

Query: 111 RKLTEYERLLKRNAITPTEIDAQRARVEIGQARLNAAQANLADLHITAPFDGTVGFIDFS 170
            K   Y+ L  + +I+    D   A      A + + +A +A   I APF G +G  +  
Sbjct: 121 AKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVF 180

Query: 171 RGKWVSAGSELLTLDNLSLMRLDLQIPERYLPQLSKGMKVQGSSEAWPNVQFEGSVVAVD 230
            G+++  G++++ L++ S+MRL   +P+R + ++S   +V    +A+P   F+GS+ A++
Sbjct: 181 LGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSISAIE 240

Query: 231 SRINQETLNLRVRVHFPNPDQRLKPGMLMSARIHFPAISAPI-IPVQALEYSGTKRFVYV 289
             ++ ++  ++V+   PN D +L+ GM   A I  P +   + +P  A+ Y+     VY+
Sbjct: 241 PAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYI 300

Query: 290 IGEDNVAKRRE---VSLGARVENQVVIEKGLQIGEKIVVQGIVNMRDNARV 337
           + E+N  KR +   V +G R E+   I +G++ G+ +V  G V + + A+V
Sbjct: 301 VSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKV 351