Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  166 bits (421), Expect = 7e-46
 Identities = 103/318 (32%), Positives = 168/318 (52%), Gaps = 11/318 (3%)

Query: 30  PAISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKVDMIAVQANQQVKKGQILIK 89
           P ISV T   Q       +  VG L+A   VDI+  VAG V  I+ ++ Q VK+GQ+L++
Sbjct: 41  PVISVTTAKAQMVDWRVVVPAVGTLQAVNGVDISGSVAGLVKAISFESGQDVKRGQVLVQ 100

Query: 90  LDDDKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEIDAQRARVEIGQARLNAAQA 149
           LD D     L  A+A L   +       +L++ + ++   ++   A +++ QA++   QA
Sbjct: 101 LDTDVEMGDLRSAQAELGLAKTSHDRNMKLVRSDTVSVAALEKTEAELKVKQAKVGGLQA 160

Query: 150 NLADLHITAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLMRLDLQIPERYLPQLSKGMK 209
            +A   I APFDG +G      G++V  G  ++ L +LSLM  D  + ++ L  L  G  
Sbjct: 161 QIAKKTIAAPFDGRLGVRKIDLGQYVQPGQMVVNLQDLSLMLCDFTVSQKDLSLLGIGQT 220

Query: 210 VQGSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHFPNPDQRLKPGMLMSARIHFPAIS 269
           V+ +++AWP V FEG V A++  ++ +T  + V+  FPN + RL+PGM     I  PA  
Sbjct: 221 VRMTTDAWPGVTFEGQVAAIEPLVDAKTGMVSVQARFPNAEGRLRPGMFARIEIERPA-G 279

Query: 270 API--IPVQALEYSGTKRFVYVIGED--------NVAKRREVSLGARVENQVVIEKGLQI 319
           AP+  +P  A+ Y+     V+V+ E+        + A+R  VSLG R +  VVI+ G+  
Sbjct: 280 APVVTVPGSAVAYNLHGDAVFVVKEEAGADGKTVSKAERVVVSLGERKDGLVVIKSGVAA 339

Query: 320 GEKIVVQGIVNMRDNARV 337
           G+ +V  G V +   + +
Sbjct: 340 GDVVVTSGQVKLEHGSLI 357