Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  138 bits (348), Expect = 2e-37
 Identities = 90/327 (27%), Positives = 170/327 (51%), Gaps = 14/327 (4%)

Query: 22  SAKEPNQPP--------AISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKVDMI 73
           ++KEP++ P        A+ V    V  +++  +L+V G + + +SV + AE+ G V+ I
Sbjct: 31  TSKEPSKSPQSTPEAMTALPVDVVEVTPERLENNLNVTGNVLSNESVSLRAEITGLVESI 90

Query: 74  AVQANQQVKKGQILIKLDDDKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEIDAQ 133
             +  Q VKKG  L+ L+DD+  A L   +   +  + + +  ++LL R AI+  E D  
Sbjct: 91  NFEEGQFVKKGTPLVYLNDDELTAQLDRLEYTKKLYEGQESRQKQLLAREAISQEEYDII 150

Query: 134 RARVEIGQARLNAAQANLADLHITAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLMRLD 193
             +     + +   +A L    I APFDG +G    S G  +S    +  + N+  ++++
Sbjct: 151 LNQYNTTLSDIKLVKAQLDKTVIKAPFDGVLGLRQISAGSVISTTDIIANIVNIDPIKIE 210

Query: 194 LQIPERYLPQLSKGMKVQGSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHFPNPDQRL 253
             IPERY  Q+  G  ++ S+ A   ++ +G V A +  I+  T  L +R   PN D++ 
Sbjct: 211 FSIPERYASQVQVGSTIEFSNNASHGLK-KGKVYAYEPVIDANTRTLTLRAISPNEDRKF 269

Query: 254 KPGMLMSARIHFPA-ISAPIIPVQAL--EYSGTKRFVYVIGEDNVAKRREVSLGARVENQ 310
            PGM ++ R +      A ++P Q+L  E +G K  ++++ ++ + + R+V +G R +++
Sbjct: 270 LPGMFVNIRFNLEVEEDALLVPSQSLIPELNGYK--LFLVNQEGIVQERQVQIGIRTDSE 327

Query: 311 VVIEKGLQIGEKIVVQGIVNMRDNARV 337
           V I  GL  GE ++  G++  ++  +V
Sbjct: 328 VQILDGLSPGEMVLTTGVLQAKEGMKV 354