Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  122 bits (305), Expect = 2e-32
 Identities = 91/346 (26%), Positives = 163/346 (47%), Gaps = 11/346 (3%)

Query: 1   MNKNTVLSLTLLTLLMNSAVLSAKEPNQPPAISVVTESVQSQQISQSLSVVGKLKAEQSV 60
           M  + ++ + L  LL++++  S  E  +     +   S      +     V ++ +   +
Sbjct: 1   MRTSILMLMGLCALLLHTSCNSHGEEKEAHVYELQVTSPVRMDTTIMEDYVCQIHSISHI 60

Query: 61  DIAAEVAGKVDMIAVQANQQVKKGQILIKLDDDKAQAALVEAKAYLQDEQRKLTEYERLL 120
           ++ A+  G ++ I V   Q VKKGQ+L K+     QA    AKA +   + +    + L 
Sbjct: 61  EVRAQERGYLEKIYVDEGQFVKKGQLLFKIMPKLYQAEFQRAKAEVSFAEIEYQNTKSLA 120

Query: 121 KRNAITPTEIDAQRARVEIGQARLNAAQANLADLHITAPFDGTVGFIDFSRGKWVSAGSE 180
            R+ + P E+   +A+++   A L  AQ +L    I APF+G +       G  +  G  
Sbjct: 121 DRDVVAPNELAMAKAKLDKANAELALAQTHLDFTEIRAPFNGIIDRFHVRVGSLIDEGEL 180

Query: 181 LLTLDNLSLMRLDLQIPE-RYLPQLSKGMKVQGSSEAWPNVQFE--------GSVVAVDS 231
           L  L + S M +   +PE  YL  +S   K   SS    N+           G V  +++
Sbjct: 181 LTNLSDNSHMWVYYNVPEAEYLDYMSNLKK--DSSATMVNLLMANNKVFGHPGKVETIEA 238

Query: 232 RINQETLNLRVRVHFPNPDQRLKPGMLMSARIHFPAISAPIIPVQALEYSGTKRFVYVIG 291
             N ET N+  R  FPNP+  L+ G   + ++  P  +A IIP +       KR+VYV+ 
Sbjct: 239 DFNHETGNIPFRATFPNPNGLLRHGETGNIQMSVPFKNAMIIPQKTTFEVLDKRYVYVLD 298

Query: 292 EDNVAKRREVSLGARVENQVVIEKGLQIGEKIVVQGIVNMRDNARV 337
           ED+    RE+++ A + +  VI+ GL+  +K++++G+  +R+N  +
Sbjct: 299 EDHKLHAREITVAAEMPHLYVIQDGLEENDKVLLEGLRLVRENDEI 344