Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., efflux RND transporter periplasmic adaptor subunit from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  166 bits (420), Expect = 9e-46
 Identities = 102/347 (29%), Positives = 174/347 (50%), Gaps = 14/347 (4%)

Query: 6   VLSLTLLTLLMNSAVLSAKEPNQPPAISV----------VTESVQSQQ-ISQSLSVVGKL 54
           V +  LL L++ +A++     ++  A             V+E+V +Q+  S  + V+G  
Sbjct: 9   VAAAVLLALMVVAAIVKVSAGDEKKAAGPGGGRGRGAQQVSEAVVAQRPFSDQIRVLGVA 68

Query: 55  KAEQSVDIAAEVAGKVDMIAVQANQQVKKGQILIKLDDDKAQAALVEAKAYLQDEQRKLT 114
           + E+SV++ +     +  +     Q V  G  L++L   +  AA++EA+A +   QR+  
Sbjct: 69  RGERSVNVTSSTTELITRVLFADGQYVSAGAPLVELQAREEDAAIIEARANVNQAQREYD 128

Query: 115 EYERLLKRNAITPTEIDAQRARVEIGQARLNAAQANLADLHITAPFDGTVGFIDFSRGKW 174
            Y+ L  R       ++     +E  +A L AAQA   D  I +PF G VG    + G  
Sbjct: 129 RYKALADRGVAPQVMLEQAETALETARASLQAAQARRGDRVIRSPFSGRVGLTTVTPGTL 188

Query: 175 VSAGSELLTLDNLSLMRLDLQIPERYLPQLSKGMKVQGSSEAWPNVQFEGSVVAVDSRIN 234
           ++ G+ + TLD+ S +R+D  +PERYL  L  G ++  +++A+ +  F G +  +D+R+N
Sbjct: 189 INPGAVITTLDDTSTIRVDFPLPERYLNLLRPGAQLTATADAYGDEPFTGRIALIDTRVN 248

Query: 235 QETLNLRVRVHFPNPDQRLKPGMLMSARIHFPAISAPIIPVQALEYSGTKRFVYVIG--- 291
           + T     R  FPNP  R++PGMLM   +      +  +P  A++Y G   FVY I    
Sbjct: 249 ETTRAATARAEFPNPGGRIRPGMLMRVAVQQGQRQSAAVPESAVQYEGAGAFVYRIAPGQ 308

Query: 292 EDNVAKRREVSLGARVENQVVIEKGLQIGEKIVVQGIVNMRDNARVS 338
             + A+R EV  GA     V I  G++ G++IV  G+  ++  A VS
Sbjct: 309 NGSTAQRVEVETGAVENGFVEILSGIEAGDRIVGSGLNRIQPGAPVS 355