Pairwise Alignments
Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056
Subject, 384 a.a., Multidrug resistance protein MdtA from Azospirillum sp. SherDot2
Score = 171 bits (433), Expect = 3e-47
Identities = 98/318 (30%), Positives = 176/318 (55%), Gaps = 2/318 (0%)
Query: 22 SAKEPNQPPAISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKVDMIAVQANQQV 81
+AK P P + V V+ + ++++ VG L + +SV + E+AG++ IA + Q+V
Sbjct: 59 AAKPPGGAPPMPVEAAQVRVGTVERTVTAVGSLLSNESVVVRPEIAGRISEIAFKEGQRV 118
Query: 82 KKGQILIKLDDDKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEIDAQRARVEIGQ 141
KG +L++LDD A+A L +A+A + + +L+ ++L+++N + A++ +
Sbjct: 119 AKGTVLVRLDDAIARATLAQAQASIAFSRAELSRADQLVRQNTGPLRNREQASAKLLADE 178
Query: 142 ARLNAAQANLADLHITAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLMRLDLQIPERYL 201
A + A+A L I APFDG +G S G +V AG +++ L+++ ++LD ++PE +L
Sbjct: 179 AAVQLARAQLDKQVIAAPFDGVLGLRKASVGDFVQAGKDIVNLEDIDTLKLDFRVPEMFL 238
Query: 202 PQLSKGMKVQGSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHFPNPDQRLKPGMLMSA 261
P + G V+ + +A+ F+G+V A+D ++ L +R PNPD L+PG+
Sbjct: 239 PAVKVGQTVRVAVDAFGGRSFDGTVYAIDPLVDVNGRALAIRARVPNPDGSLRPGLFARV 298
Query: 262 RIHFPAI-SAPIIPVQALEYSGTKRFVYVIGEDNVAKRREVSLGARVENQVVIEKGLQIG 320
+ + A +IP QA+ G +FV+ + + V + R V LG R +V I KGL G
Sbjct: 299 SLTLTTVPDAVLIPEQAIVAFGKDQFVFKVVDGKVVQTR-VVLGERRNAEVEIAKGLAPG 357
Query: 321 EKIVVQGIVNMRDNARVS 338
+ +V G + +RD V+
Sbjct: 358 DMVVTAGQLKIRDGVPVT 375