Pairwise Alignments

Query, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., Multidrug transporter MdtA from Alteromonas macleodii MIT1002

 Score =  185 bits (469), Expect = 2e-51
 Identities = 104/308 (33%), Positives = 179/308 (58%), Gaps = 1/308 (0%)

Query: 31  AISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKVDMIAVQANQQVKKGQILIKL 90
           A  V T  V SQ    ++  +G   A +SV+I A+V   V  I  +   +  +G++L++L
Sbjct: 39  ATPVKTALVSSQAFPITIESLGTATANESVNITAQVTDTVKTINFEDGDKATEGELLVQL 98

Query: 91  DDDKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEIDAQRARVEIGQARLNAAQAN 150
           ++ + +A + E KA + + +R+ T    L + NA +   +D Q+ARV+  QA+L+ A A 
Sbjct: 99  NNTEERARVEELKANIDEAKRQFTRISDLRQSNATSEQLLDEQQARVKALQAQLDVALAQ 158

Query: 151 LADLHITAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLMRLDLQIPERYLPQLSKGMKV 210
           L DL I APF G +G  + S G  V  G  + TLD++SL+++D  I E +L  ++KG  +
Sbjct: 159 LNDLQIRAPFSGLLGNREISIGSLVQPGDTITTLDDISLIKVDFSIAESHLASVAKGQAL 218

Query: 211 QGSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHFPNPDQRLKPGMLMSARIHFPAISA 270
             SS A+P  +F G +  +D+R++  + ++RVR    N D RL+PGML++  +    ++ 
Sbjct: 219 SASSVAYPGEEFTGKISNIDTRLDPISRSIRVRATIDNQDNRLRPGMLLTVIVEKRVLNT 278

Query: 271 PIIPVQALEYSGTKRFVYVIGEDNVAKRREVSLGARVENQVVIEKGLQIGEKIVVQGIVN 330
            ++P +AL     K++VYV+ +DNVA + EV +G R    V I  GL  G++++ +G + 
Sbjct: 279 LVLPEKALVPVQDKQYVYVV-KDNVAHQTEVVIGERRPGLVQIVSGLNEGDEVITEGTLR 337

Query: 331 MRDNARVS 338
           +RD + V+
Sbjct: 338 VRDQSPVN 345