Pairwise Alignments

Query, 478 a.a., PTS trehalose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., PTS N-acetylmuramic acid EIIBC component from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (371), Expect = 8e-40
 Identities = 119/456 (26%), Positives = 214/456 (46%), Gaps = 40/456 (8%)

Query: 5   MSKIAKQDVTRLIELVGGESNIASVTHCLTRLRFVLNQPEQADKAGLEALSMVKGCFTNA 64
           M+KI +  + +++ LVGG  N+A   +C+TRLR  LN    AD A L+ +S V G   + 
Sbjct: 1   MAKITQTMMAQVLSLVGGSGNVAKCGNCMTRLRLTLNNSALADHAALKKISGVMGVVESD 60

Query: 65  GQFQVVIG-----TEVDQVYKMLLEQTGKQ---AVSKDDAKVAARQ--------NMNVLE 108
            Q Q+++G     T  D +  ++  ++G     AVS+ D    A Q          + ++
Sbjct: 61  AQLQIILGPGKAQTAADMMNALI--ESGDNVAPAVSEADLSTIAAQQKKQMKSKQTSAVQ 118

Query: 109 RGISHLAEIFVPLLPAIITGGLILGFRNVIGDIRMFDGKTLTEISQFWASVHAFLWLIGE 168
           R +S  A IF PL+P  I  GL+LG   ++  I +  G+T    S+F   + A+L + G+
Sbjct: 119 RFLSKFATIFTPLIPGFIAAGLLLGIATLLEQIYVV-GQT---PSEFMLDLVAYLKVFGK 174

Query: 169 AIFFFLPVGVCWSTVKKLGGTPILGITLGVTLV---SPQLMNAYLIGKEVPEVWDFGLFA 225
            +F FL + + ++  +  GG+ + G  L    V    P+       G       +F  FA
Sbjct: 175 GLFAFLSILIGYNAQQAFGGSGVNGAILASLFVLGYDPEATKGIYSGMS-----EFFGFA 229

Query: 226 IEKVGYQAQVIPAILAGVALAFIENNLRRVVPSYLYLVVVPFVSIIVSVVLAHAFIGPFG 285
           I+  G    +I  +LA +  A +E  +R  +P  L +++   V++++   +    I P G
Sbjct: 230 IDPRG---NIIGVLLAAILGAQVERKVREYMPDDLDMILTSVVTLLIMGAVTFLIIMPIG 286

Query: 286 RVIGDGVAFAAKAAMTGDFAVIGSTLFGFMYAPLVITGIHHTTNAVDLQLMQELGGTPIW 345
             +  G+++     +  +   +G+ +   ++   V+ GIH     V   LM+  G   ++
Sbjct: 287 GELFKGMSW---LFLNLNDNPLGAAILAGLFLISVVFGIHQGFVPVYFALMEAQGFNSLF 343

Query: 346 PLIALSNIAQASAVVGIIIISKKQGERDISVPAA-ISAYLGVTEPAMYGINLKYKFPMLS 404
           P++A++   Q  A + +   +KK+      +  A I   LG+ EP +YG+ L    P ++
Sbjct: 344 PILAMAGAGQVGASLALYARAKKETTIRTQIKGAIIPGILGIGEPLIYGVTLPRVKPFVT 403

Query: 405 AMIGSALAAAVCGSAGVMANGIG---VGGLPGILSI 437
           A IG A      G    +   +G   V G  G+++I
Sbjct: 404 ACIGGAAGGFFIGLISYLGLPVGLNTVFGPSGVVAI 439