Pairwise Alignments

Query, 478 a.a., PTS trehalose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., PTS system sucrose-specific EIIBC component from Escherichia coli ECOR38

 Score =  278 bits (711), Expect = 3e-79
 Identities = 160/463 (34%), Positives = 260/463 (56%), Gaps = 18/463 (3%)

Query: 4   DMSKIAKQDVTRLIELVGGESNIASVTHCLTRLRFVLNQPEQADKAGLEALSMVKGCFTN 63
           D  KIA+     L+ L+GG+ NI S  HC TRLR VL     AD+  +  +  VKGCF N
Sbjct: 2   DFDKIAQS----LLPLLGGKENITSAAHCATRLRLVLVDDTLADQHAIGQIDGVKGCFRN 57

Query: 64  AGQFQVVIGTEV-DQVYKMLLEQTGKQAVSKDDAKVAARQNMNVLERGISHLAEIFVPLL 122
           +GQ Q++ GT V ++VY   ++  G    SK D    A Q +N  +R    L+ IFVP++
Sbjct: 58  SGQMQIIFGTGVVNKVYAAFIQVAGISESSKADTARLAAQKLNPFQRIARLLSNIFVPII 117

Query: 123 PAIITGGLILGFRNVIGDIRMFDGKTLTEISQFWASVHAFLWLIGEAIFFFLPVGVCWST 182
           PAI+  GL++G   ++G ++ +             +++  L +   A F  LP+ + ++ 
Sbjct: 118 PAIVASGLLMG---LLGMVKTYGWVNADN------AIYILLDMCSSAAFIILPILIGFTA 168

Query: 183 VKKLGGTPILGITLGVTLVSPQLMNAYLIGKEVPEVWDFGLFAIEKVGYQAQVIPAILAG 242
            ++ GG P LG TLG  L  P L NA+ +      +  FG F I  +GYQ  V P +LA 
Sbjct: 169 AREFGGNPYLGATLGGILTHPALTNAWGVAAGFQTMNFFG-FEIAMIGYQGTVFPVLLAV 227

Query: 243 VALAFIENNLRRVVPSYLYLVVVPFVSIIVSVVLAHAFIGPFGRVIGDGVAFAAKAAMTG 302
             ++ +E  LRR +P  L L++ PF+++++S  +A   IGP GR +GDG++F   + +  
Sbjct: 228 WFMSIVEKQLRRFIPDALDLILTPFLTVVISGFIALLIIGPAGRALGDGISFVL-STLIA 286

Query: 303 DFAVIGSTLFGFMYAPLVITGIHHTTNAVDLQLMQE--LGGTPIWPLIALSNIAQASAVV 360
               +   LFG +Y+ +VITGIHH+ +A++  L+    +G   + P+ A++N+AQ  A +
Sbjct: 287 HAGWLAGLLFGGLYSAIVITGIHHSFHAIEAGLLGNPAIGVNFLLPIWAMANVAQGGACL 346

Query: 361 GIIIISKKQGERDISVPAAISAYLGVTEPAMYGINLKYKFPMLSAMIGSALAAAVCGSAG 420
            +   +K    + I++P+A SA LG+TE A++GINL++  P ++A+IG A   A   S  
Sbjct: 347 AVWFKTKDTKIKAITLPSAFSAMLGITEAAIFGINLRFVKPFIAALIGGAAGGAWVVSVH 406

Query: 421 VMANGIGVGGLPGILSIQPQFWSIYLVAMLIAILVPAALTLLM 463
           V    +G+  +PG+  +QP     Y++ M+IA  V  +L+LL+
Sbjct: 407 VYMTAVGLTAIPGMAIVQPTSLVNYIIGMVIAFAVAFSLSLLL 449