Pairwise Alignments

Query, 478 a.a., PTS trehalose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., N-acetylmuramic acid permease, EIIBC component, PTS system from Escherichia coli BL21

 Score =  127 bits (319), Expect = 8e-34
 Identities = 104/423 (24%), Positives = 191/423 (45%), Gaps = 29/423 (6%)

Query: 7   KIAKQDVTRLIELVGGESNIASVTHCLTRLRFVLNQPEQADKAGLEALSMVKGCFTNAGQ 66
           +I+ + +  ++  VGG  NIAS  +C+TRLR  ++     D   ++ L  VKG    + Q
Sbjct: 4   EISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVDP-DIKTLEGVKGVILTSDQ 62

Query: 67  FQVVIGT-EVDQVYKMLLEQTGKQAVSKDDAKVAARQNMNV-------LERGISHLAEIF 118
            QVV G  +  +  K + E  G+  V +D A++AA+    +       +++ ++  A IF
Sbjct: 63  VQVVFGPGKAHRAAKAMSELLGEAPV-QDAAEIAAQNKRQLKAKQTSGVQQFLAKFATIF 121

Query: 119 VPLLPAIITGGLILGFRNVIGDIRMFDGKTLTEISQFWASVHAFLWLIGEAIFFFLPVGV 178
            PL+P  I  GL+LG   +I  +          +         F+ +  + +F FL + V
Sbjct: 122 TPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPD----ALNFMKVFSKGLFTFLVILV 177

Query: 179 CWSTVKKLGGTPILGITLGVTLV---SPQLMNAYLIGKEVPEVWDFGLFAIEKVGYQAQV 235
            ++  +  GGT + G  +    +   +P     Y  G       DF    I+  G    +
Sbjct: 178 GYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFH-----DFFGLPIDPRG---NI 229

Query: 236 IPAILAGVALAFIENNLRRVVPSYLYLVVVPFVSIIVSVVLAHAFIGPFGRVIGDGVAFA 295
           I  ++A  A A IE  +RR +P  L +++   ++++++  LA+  I P G  + +G+++ 
Sbjct: 230 IGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIMPLGGWLFEGMSWL 289

Query: 296 AKAAMTGDFAVIGSTLFGFMYAPLVITGIHHTTNAVDLQLMQELGGTPIWPLIALSNIAQ 355
                +  F   G  +   ++   V+ G+H     V L LM   G   ++P+++++   Q
Sbjct: 290 FMHLNSNPF---GCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNSLFPILSMAGAGQ 346

Query: 356 ASAVVGIIIISKKQGERDISVPAAI-SAYLGVTEPAMYGINLKYKFPMLSAMIGSALAAA 414
             A + +   ++        V  AI    LGV EP +YG+ L    P ++A +G A    
Sbjct: 347 VGAALALYWRAQPHSVLRSQVRGAIIPGLLGVGEPLIYGVTLPRMKPFITACLGGAAGGL 406

Query: 415 VCG 417
             G
Sbjct: 407 FIG 409