Pairwise Alignments

Query, 316 a.a., HTH-type transcriptional regulator TreR from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  118 bits (295), Expect = 2e-31
 Identities = 88/306 (28%), Positives = 154/306 (50%), Gaps = 16/306 (5%)

Query: 9   DIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGGSQKVVGII 68
           D+ARL+GV KSTVSRV+ ++  VK  T+ KV + + + GY+ ++ A+ ++     ++G+I
Sbjct: 6   DVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLIGVI 65

Query: 69  ISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVDGVIVFGFT 128
           + R+ S +  + V  +   F   G  V++  +     K   ++++  +++V+G IVF  T
Sbjct: 66  VPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEG-IVFYAT 124

Query: 129 DIDHDALLSWQHRCVLLAMHSDE-----ISSINYDNAGVIERALQHLAQKQLRDIAFIGV 183
            +D   + + QH  V + +   +     I SI +D+  V   A Q L +   + I FIGV
Sbjct: 125 HLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQIGFIGV 184

Query: 184 DPRD---KTTGEQRLNAYLNWCVEHEIVANYQTGQLHHESAYLLVDKVLTE--QTQAIVC 238
              D        Q L   L +    + +  +  G    ES Y +  +   +  Q   + C
Sbjct: 185 QSDDIAVDVLRSQGLQQALGF--HQQTLLFHARGNFSIESGYQMAKQAYLDYPQLDGLFC 242

Query: 239 ASDTLALGVIKRLQEL---QRDDVVVTGVGGNELLSFLFPNIFSVDPGYREAGKLAADLL 295
           A+D LA+G IK LQEL       V + GVG +EL     P + + +  + +AG+ AA +L
Sbjct: 243 ATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENAAKML 302

Query: 296 IEQLCG 301
           +E++ G
Sbjct: 303 LERIAG 308