Pairwise Alignments

Query, 316 a.a., HTH-type transcriptional regulator TreR from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., PurR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (254), Expect = 1e-26
 Identities = 77/319 (24%), Positives = 155/319 (48%), Gaps = 28/319 (8%)

Query: 6   TILDIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGGSQKVV 65
           TI D+ARL+GV  +TVS V+     V   T+ KV + + +  Y PS  A++++  + + +
Sbjct: 3   TIKDVARLAGVSTTTVSHVINKTRFVAETTQEKVMEAVKQLNYAPSAVARSLKCNTTRTI 62

Query: 66  GIIISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVDGVIVF 125
           G+++++  +   ++ +  +    Y  GY +++  +    EK   ++++LA+++VDG++V 
Sbjct: 63  GMLVTQSTNLFFSEVIDGVESYCYRQGYTLILCNTGGIYEKQRDYIRMLAEKRVDGILVM 122

Query: 126 ---------GFTDIDHD---ALLSWQHRCVLLAMHSDEISSINYDNAGVIERALQHLAQK 173
                       D   D    ++ W         H+D+I   N +  G +  A ++L  +
Sbjct: 123 CSDLTQELQDMLDAHKDIPKVVMDWGPE----TSHADKIID-NSEEGGYL--ATKYLTDR 175

Query: 174 QLRDIAFIGVDPRDKTTGEQRLNAYLNWCVEHEIVANYQ---TGQLHHESAYLLVDKVLT 230
              +IA +      K   ++R+  +     E ++  N      G    ++A L  DK++ 
Sbjct: 176 GHTEIACLS-GHFVKAACQERIQGFRRAMAEAKLTVNEDWILEGNFECDTAVLAADKIIA 234

Query: 231 --EQTQAIVCASDTLALGVIKRLQELQ---RDDVVVTGVGGNELLSFLFPNIFSVDPGYR 285
             ++  A+ C +DT+ALG++ RLQ+      +D+ V G    EL  +  P + +V    R
Sbjct: 235 MDKRPTAVFCFNDTMALGLMSRLQQKGIRIPEDMSVIGYDNIELAEYFSPPLTTVHQPKR 294

Query: 286 EAGKLAADLLIEQLCGSDH 304
             GK A ++L+E++   +H
Sbjct: 295 RVGKNAFEILLERIKDKEH 313