Pairwise Alignments

Query, 316 a.a., HTH-type transcriptional regulator TreR from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., Trehalose operon transcriptional repressor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  265 bits (677), Expect = 1e-75
 Identities = 145/301 (48%), Positives = 194/301 (64%)

Query: 1   MNRKLTILDIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGG 60
           M  +LTI DIARLSGVGKSTVSRVL N+  V   TR +VE V+ + G+ PS+SA+ MRG 
Sbjct: 1   MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQ 60

Query: 61  SQKVVGIIISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVD 120
           S KVV II++RLDS SEN AV TML AFY  GYD ++MESQFS      HL +L +R +D
Sbjct: 61  SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPTLVMEHLGMLRRRNID 120

Query: 121 GVIVFGFTDIDHDALLSWQHRCVLLAMHSDEISSINYDNAGVIERALQHLAQKQLRDIAF 180
           GV++FGFT I  + +  W+   VLLA  +   +S+ YD+ G I   +Q L ++  R+I+F
Sbjct: 121 GVVLFGFTGITEELIAPWKASLVLLARDAQGFASVCYDDEGAIHILMQRLYEQGHRNISF 180

Query: 181 IGVDPRDKTTGEQRLNAYLNWCVEHEIVANYQTGQLHHESAYLLVDKVLTEQTQAIVCAS 240
           +GV   D TTG++R +AYL +C +H++        L  +  Y     V+   T A+VCA+
Sbjct: 181 LGVPHSDITTGKRRHDAYLAFCKKHKLHPVAALPGLAMKQGYEHTASVIMPDTTALVCAT 240

Query: 241 DTLALGVIKRLQELQRDDVVVTGVGGNELLSFLFPNIFSVDPGYREAGKLAADLLIEQLC 300
           DTLALG  K LQE + + + +  VG   L+ FL P I +VDPGY EAG+ AA  LIEQ+ 
Sbjct: 241 DTLALGASKYLQEQRIETLQLASVGNTPLIKFLHPEIVTVDPGYAEAGRQAASQLIEQIN 300

Query: 301 G 301
           G
Sbjct: 301 G 301