Pairwise Alignments

Query, 316 a.a., HTH-type transcriptional regulator TreR from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., trehalose repressor (NCBI) from Escherichia coli BW25113

 Score =  270 bits (690), Expect = 3e-77
 Identities = 149/301 (49%), Positives = 196/301 (65%)

Query: 1   MNRKLTILDIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGG 60
           M  +LTI DIARLSGVGKSTVSRVL N+  V   TR +VE V+ + G+ PS+SA+ MRG 
Sbjct: 1   MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSPSRSARAMRGQ 60

Query: 61  SQKVVGIIISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVD 120
           S KVV II++RLDS SEN AV TML AFY  GYD ++MESQFS +    HL VL +R +D
Sbjct: 61  SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID 120

Query: 121 GVIVFGFTDIDHDALLSWQHRCVLLAMHSDEISSINYDNAGVIERALQHLAQKQLRDIAF 180
           GV++FGFT I  + L  WQ   VLLA  +   +S+ YD+ G I+  +Q L  +  R+I++
Sbjct: 121 GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY 180

Query: 181 IGVDPRDKTTGEQRLNAYLNWCVEHEIVANYQTGQLHHESAYLLVDKVLTEQTQAIVCAS 240
           +GV   D TTG++R  AYL +C  H++        L  +  Y  V KV+T +T A++CA+
Sbjct: 181 LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT 240

Query: 241 DTLALGVIKRLQELQRDDVVVTGVGGNELLSFLFPNIFSVDPGYREAGKLAADLLIEQLC 300
           DTLALG  K LQE + D + +  VG   L+ FL P I +VDPGY EAG+ AA  LI Q+ 
Sbjct: 241 DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT 300

Query: 301 G 301
           G
Sbjct: 301 G 301