Pairwise Alignments

Query, 316 a.a., HTH-type transcriptional regulator TreR from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., transcriptional regulator, LacI family from Enterobacter asburiae PDN3

 Score =  109 bits (272), Expect = 1e-28
 Identities = 84/305 (27%), Positives = 151/305 (49%), Gaps = 16/305 (5%)

Query: 9   DIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGGSQKVVGII 68
           D+AR++GV  STVS V+ ND  V    R KVE  + E  Y PS  A++++    + +G++
Sbjct: 3   DVARMAGVSTSTVSHVINNDRFVSEAIREKVEAAVKELNYAPSALARSLKLNQTRTIGML 62

Query: 69  ISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVDGVIVFGFT 128
           I+   +P  ++ V  + ++ +  GY +V+  ++   ++ N +L+ L +++VDG+++    
Sbjct: 63  ITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLCTE 122

Query: 129 DIDHDALLSWQHRCVLLAMHS----DEISSINYDNAGV-IERALQHLAQKQLRDIAFIGV 183
                  +  ++  +   M      D  S +  DN+ +  + A QHL  K    IA I  
Sbjct: 123 THQPSKEIIQRYPSIPTVMMDWAPFDGTSDLIQDNSLLGGDMATQHLIDKGHTRIACI-T 181

Query: 184 DPRDKTTGEQRLNAYLNWCVEHEIVA---NYQ-TGQLHHESAYLLVDKVLTE--QTQAIV 237
            P DKT    RL  YL+  +E   +A    Y+ TG       +  + K+L +  + QA+ 
Sbjct: 182 GPLDKTPARLRLEGYLS-AMERAGLAIPDGYRITGDFEFNGGFEAMQKLLAQKPRPQAVF 240

Query: 238 CASDTLALGVIKRLQEL---QRDDVVVTGVGGNELLSFLFPNIFSVDPGYREAGKLAADL 294
             +D +A G  + L +      DD+ V G    EL S++ P + ++     E G+LA D+
Sbjct: 241 IGNDAMAFGAYQALYQAGLRVPDDMAVIGYDDIELASYMTPPLTTIHQPKDELGELAIDV 300

Query: 295 LIEQL 299
           LI ++
Sbjct: 301 LIHRM 305