Pairwise Alignments

Query, 316 a.a., HTH-type transcriptional regulator TreR from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., ribose operon transcriptional repressor RbsR from Escherichia coli ECRC62

 Score =  102 bits (253), Expect = 2e-26
 Identities = 84/307 (27%), Positives = 148/307 (48%), Gaps = 14/307 (4%)

Query: 6   TILDIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGGSQKVV 65
           T+ D+ARL+GV  STVS V+  D  V     AKVE  I E  Y PS  A++++      +
Sbjct: 3   TMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTHTI 62

Query: 66  GIIISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVDGVIVF 125
           G++I+   +P  ++ V  + ++ +  GY +V+  ++   ++ N +L+ L +++VDG+++ 
Sbjct: 63  GMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLL 122

Query: 126 GFTDIDHDALLSWQHRCVLLAMHS----DEISSINYDNAGV-IERALQHLAQKQLRDIAF 180
                     +  ++  V   M      D  S +  DN+ +  + A Q+L  K    IA 
Sbjct: 123 CTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTRIAC 182

Query: 181 IGVDPRDKTTGEQRLNAYLNWCVEH--EIVANYQ-TGQLHHESAYLLVDKVLTE--QTQA 235
           I   P DKT    RL  Y          I   Y+ TG       +  + ++L+   + QA
Sbjct: 183 I-TGPLDKTPARLRLEGYRAAMKRAGLSIPDGYEVTGDFEFNGGFDAMRQLLSHPLRPQA 241

Query: 236 IVCASDTLALGVIKRLQELQ---RDDVVVTGVGGNELLSFLFPNIFSVDPGYREAGKLAA 292
           +   +D +A+GV + L + +     D+ V G    EL SF+ P + ++     E G+LA 
Sbjct: 242 VFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGELAI 301

Query: 293 DLLIEQL 299
           D+LI ++
Sbjct: 302 DVLIHRI 308