Pairwise Alignments

Query, 316 a.a., HTH-type transcriptional regulator TreR from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., LacI family transcriptional regulator from Dickeya dianthicola ME23

 Score =  102 bits (255), Expect = 9e-27
 Identities = 90/317 (28%), Positives = 148/317 (46%), Gaps = 27/317 (8%)

Query: 5   LTILDIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGGSQKV 64
           ++I  IARL+GV  +TVSRVL N   VKP+ R +V   I +S Y P+  A+ +R     +
Sbjct: 1   MSIQKIARLAGVSVATVSRVLNNQDSVKPQNRERVLNAIQQSNYQPNLLARQLRTAKSHM 60

Query: 65  VGIIISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVDGVIV 124
           + +++S + +P     V  +      +GY +++  S     +  + L +L+ + VDGVI 
Sbjct: 61  LLVMVSNIANPFCADVVKGIESEAERNGYRILLCNSGSDTARAKSSLSLLSGKMVDGVIT 120

Query: 125 FG-------FTDIDHDALLSWQHRCVLLAMHSD--EISSINYDNAGVIERALQHLAQKQL 175
                     T I  DA   W    V  A ++D   +SS+  D+       L+HL +   
Sbjct: 121 MDALSRLPELTTIIGDA--PW----VQCAEYADAAAVSSVGIDDRLASRFVLEHLLKNNR 174

Query: 176 RDIAFIGVDPRDKTTGEQRLNAYLNWCVEHE------IVANYQTGQLHHESAYLLVDKVL 229
           + IA I  D   K   + R   Y     EH       I A+  + Q   ++   L+D+ +
Sbjct: 175 QRIAMINHDLNYK-YAQLREQGYREMIAEHALHYDSVIYASELSYQAGKKAMLALLDEEI 233

Query: 230 TEQTQAIVCASDTLALGVIKRLQE--LQ-RDDVVVTGVGGNELLSFLFPNIFSVDPGYRE 286
             +  A+   SDTLA G +K +++  LQ   D+ V G  G EL     P + +V    +E
Sbjct: 234 --RPDAVFAVSDTLAAGALKAIEDTGLQVAKDIAVIGFDGTELSYITSPQLSTVQQPSQE 291

Query: 287 AGKLAADLLIEQLCGSD 303
            G+ A  LL++++   D
Sbjct: 292 IGRQAVKLLLQKINDPD 308