Pairwise Alignments

Query, 316 a.a., HTH-type transcriptional regulator TreR from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., Transcriptional regulators from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  103 bits (258), Expect = 5e-27
 Identities = 88/329 (26%), Positives = 156/329 (47%), Gaps = 25/329 (7%)

Query: 1   MNRKLTILDIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGG 60
           MN+ +TI DIA+  GV  +TVSR L + P V P+T+ ++     + GY  +  A  +R  
Sbjct: 1   MNKDITIYDIAKNLGVSPTTVSRALNDHPAVNPKTKKRIFDAADQMGYQSNVFASNLRSK 60

Query: 61  SQKVVGIIISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVD 120
               +GII+ RL+S  ++  ++ M +     GY+++I +S  S EK  A+ + +   +VD
Sbjct: 61  RTNNIGIIVPRLNSSFQSSVLAGMEKVANEAGYNLIISQSLESYEKEKANARSMFNSRVD 120

Query: 121 GVIV--FGFTD--------IDHDALLSWQHRCVLLAMHSDEISSINYDNAGVIERALQHL 170
           G++V   G TD        +D    + +  R    + H    + +  DN+     A QHL
Sbjct: 121 GLLVSLAGDTDKTKHFQPFMDKGTPILFFDRVASQSGH----TGVVIDNSQAGYNATQHL 176

Query: 171 AQKQLRDIAFIGVDPRDKTTGEQRLNAYLNWCVEHEI---VANYQTGQLHHESAYLLVDK 227
            Q+  ++I  +  + +    GE RL  Y    ++H+I     N     L+ E+   +  K
Sbjct: 177 IQQGCKNIIHVLGNLKINVYGE-RLKGYKYALMDHDIPFTQENILHSDLNEEAGEDIAHK 235

Query: 228 VLTEQ--TQAIVCASDTLALGVIKRLQELQ---RDDVVVTGVGGNELLSFLFPNIFSVD- 281
           +L+       +  ++D  A   I+ L++      +D+ V G   + +   + PN+ +   
Sbjct: 236 ILSMDPLPDGLFVSNDACAASCIRSLKQAGIKIPEDIAVVGFNNDMISRLIEPNLTTTHY 295

Query: 282 PGYREAGKLAADLLIEQLCGSDHGCVHLT 310
           PGY E G++A   LI  L  +  G +H T
Sbjct: 296 PGY-EMGEVAMKNLINHLTDNTEGVLHNT 323