Pairwise Alignments

Query, 316 a.a., HTH-type transcriptional regulator TreR from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., Transcriptional regulators from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  102 bits (253), Expect = 2e-26
 Identities = 89/316 (28%), Positives = 151/316 (47%), Gaps = 19/316 (6%)

Query: 4   KLTILDIARLSGVGKSTVSRVLTNDPKVKPETRAKVEQVIAESGYVPSKSAQTMRGGSQK 63
           ++TI DIA    +  STVSR L N P++K ETR KV  +  +  Y P+  AQ++R    K
Sbjct: 5   QVTIRDIALKLNISISTVSRALRNSPEIKLETRKKVLAMAEKLNYSPNVVAQSLRVNKTK 64

Query: 64  VVGIIISRLDSPSENKAVSTMLQAFYAHGYDVVIMESQFSREKTNAHLKVLAKRQVDGVI 123
            +GI++  L S      +S +    Y  GY+V+I +S  + E+  + ++ L   +VDG++
Sbjct: 65  TLGIVVPELASHFFASNISGIQDTAYRRGYNVMICQSNENFEQEKSDIRTLVSSRVDGLL 124

Query: 124 VF---GFTDIDH-DALLSWQHRCVLL--AMHSDEISSINYDNAGVIERALQHLAQKQLRD 177
           +         DH   L+  +   VL    +    +S++  D+     +  +HL ++  + 
Sbjct: 125 ISLSRETVSFDHLQNLIDREIPFVLFDRILEGLPVSTVTVDDTLGAYKVTRHLIEQGCKR 184

Query: 178 IAFIGVDPRDKTTGEQRLNAYLNWCVEHEIVANYQTGQLHH-----ESAYLLVDKVL--T 230
           IAFI   P+     ++R+  Y     E  I    +TG + H     E    LV ++L   
Sbjct: 185 IAFIS-GPKGMYISQKRMAGYEKALKEEGI--PLETGLVKHSDLTVEVTQSLVGELLDGP 241

Query: 231 EQTQAIVCASDTLALGVIKRLQELQR---DDVVVTGVGGNELLSFLFPNIFSVDPGYREA 287
           E+  AI   +D +A+ V+K L+        D+ + G     +   L P + +VD    E 
Sbjct: 242 ERPDAIFAINDPVAIDVMKFLKAKGMRIPQDIALVGFTNMPVSDALEPALSTVDQPAYEM 301

Query: 288 GKLAADLLIEQLCGSD 303
           G+LAA+ L++QL   D
Sbjct: 302 GRLAANNLLDQLMDPD 317