Pairwise Alignments

Query, 225 a.a., methionine ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) from Variovorax sp. SCN45

 Score = 73.9 bits (180), Expect = 4e-18
 Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 19/196 (9%)

Query: 24  TLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSVPFLVLMVAI 83
           TL +V  +      +G+PLGV+L ++ +          R +  V++  ++ P  V +V +
Sbjct: 166 TLSLVLTSLVFCMVIGLPLGVLLASSDRA--------QRIMRPVLDAMQTTPAFVYLVPV 217

Query: 84  IPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPLQIIR 143
           +    ++ G  IG    ++   I A+  + RL    L +V   L+EAA++ GA+P Q++ 
Sbjct: 218 V----MLFG--IGNVPGVIVTIIFALAPLVRLTNLGLRQVRPDLIEAARAYGASPWQMLV 271

Query: 144 KVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDITIMAV---- 199
           KV LP A+P+I+  +   L+  +S   +A  +  GGLG + +R G  R D+ +  V    
Sbjct: 272 KVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVGGLGQMVLR-GIGRLDMGLATVGGLG 330

Query: 200 TVVMLIVLVQIIQSIG 215
            V++ I L ++ Q++G
Sbjct: 331 IVLLAISLDRLTQAMG 346