Pairwise Alignments

Query, 225 a.a., methionine ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

 Score = 79.7 bits (195), Expect = 6e-20
 Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 14/167 (8%)

Query: 20  ATWQTLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSVPFLVL 79
           AT +TL +V  A AV   +GIPLG++    K         +   +   +++ +++P  V 
Sbjct: 154 ATTETLALVIAASAVCMIIGIPLGILAARRKW--------IYAGMRPALDLMQTIPTFVY 205

Query: 80  MVAIIPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPL 139
           ++  + +  L      G    ++   I AIP   RL    ++  P  LVEAA + GATP 
Sbjct: 206 LIPALVLFGL------GMVPGLIATVIFAIPAPVRLTRLGIVSTPPALVEAAVAFGATPS 259

Query: 140 QIIRKVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIR 186
           Q++RKV LP A P I+  +T T++  +S   ++  VG  GLG   +R
Sbjct: 260 QVLRKVELPFAAPQIMAGLTQTIMLSLSMVVISALVGANGLGVPVVR 306