Pairwise Alignments

Query, 225 a.a., methionine ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 73.2 bits (178), Expect = 5e-18
 Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 14/158 (8%)

Query: 24  TLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSVPFLVLMVAI 83
           TL +V IA  +   +G+PLG+++  +++        L R +  V+++ +++P  V ++ +
Sbjct: 110 TLSIVTIATLIAIVIGLPLGILMGRSER--------LQRLINPVLDVMQTLPSFVYLIPV 161

Query: 84  IPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSMGATPLQIIR 143
           +    +I G  IG    ++ + I AIP V RL    +  V   ++EAA + G++  Q + 
Sbjct: 162 V----VIFG--IGKVPGLIAVVIYAIPPVIRLTSLGIRLVDREVLEAADAFGSSNGQKLF 215

Query: 144 KVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLG 181
            V LP ALPTI+  +  T++  ++   +A  VG GGLG
Sbjct: 216 NVQLPLALPTIMTGINQTIMMALAMVVVASMVGVGGLG 253