Pairwise Alignments

Query, 269 a.a., methionine ABC transporter substrate-binding protein MetQ from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., cytoplasmic membrane lipoprotein-28 from Escherichia coli BL21

 Score =  298 bits (764), Expect = 6e-86
 Identities = 153/272 (56%), Positives = 200/272 (73%), Gaps = 3/272 (1%)

Query: 1   MKFSLKSLLTIAAAA-STLILAGCGEKAVDNNKVKIGVMAGAEAQVAEVAAKVAKEKYNL 59
           MK +   L T AA   + ++LAGC +   D   +K+GV+ GAE  VAEVA KVAKEKY L
Sbjct: 1   MKLTTHHLRTGAALLLAGILLAGCDQSISDAKHIKVGVINGAEQDVAEVAKKVAKEKYGL 60

Query: 60  DVELVTFTDYVTPNAALDDGSIDANAFQHKPYLDKQIADRGYKLAIVGNTFVYPIAGYSK 119
           DVELV F+  + PN A + G +DAN FQH+P+L++     GYKL  VGNTFV+P+AGYSK
Sbjct: 61  DVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSK 120

Query: 120 QIKSVDELQDGARIAVPNDPTNLGRSLLLLQQQGLLKLREDVGLLATVRDIVENPKKLEI 179
           +IK+V ++++GA +A+PNDPTNLGR+LLLLQ++ L+ L+E  GLL T  DI +NP+ L+I
Sbjct: 121 KIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQI 180

Query: 180 LELDAAQLPRSLDD--VALSIINTTYASSINLTPEKDGIFVENKESPYVNILVAREANVN 237
           +EL+ AQLPR LDD  V ++II+TTY     L+P  D +F+E+K SPYVNILVARE N N
Sbjct: 181 MELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKN 240

Query: 238 AENVQNFKKAYQTDEVAKAASEIFQGGAVKGW 269
           AENV+ F ++YQ+ EVAKAA  IF GGAV GW
Sbjct: 241 AENVKEFLQSYQSPEVAKAAETIFNGGAVPGW 272