Pairwise Alignments

Query, 524 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  150 bits (380), Expect = 1e-40
 Identities = 93/334 (27%), Positives = 179/334 (53%), Gaps = 9/334 (2%)

Query: 193 LITELDFNGESGDQLTDIRTKLLLGVNTHTLLELTLEVLRLVVDGSHAERKAAEAFLEQV 252
           L+ +L        Q  ++R ++  G+N + L+ +  ++  L++  + + +   E +L+Q+
Sbjct: 313 LLDDLSLPERHKAQAQEMRERVARGLNWYELIPVLDDLAVLMLAITDSGQHEFETYLQQL 372

Query: 253 NLSIGNNLKSATQNLEQSQSYMAHR----QEMNGELSSLVARSQTALKEQTELEQLKLKM 308
           N      L+    +L ++ +  A      +E++ +L   V   Q++++   +++ LK  +
Sbjct: 373 N----ERLEGFQSHLHEASAGHADNSTAARELDSQLREHVDGLQSSVQGAADVDSLKHIL 428

Query: 309 APLLREMS-SLSERLLLAEQREQALLERMRYSKDQMEALSDLAQDYRRRLEDQALRAQLD 367
              L  +  ++ E     ++REQ L  R++   +++ ++   A  YR  LE+Q  +A LD
Sbjct: 429 ENRLEGLLVTMDEHKHERDRREQELAGRLQGLSERVASMEHEALGYREHLEEQRQKALLD 488

Query: 368 PLTKVYNRSSFTERLEHEYRRWIRTQHNLRVVLFDIDKFKSINDSFGYTAGDKALSIIAR 427
           PLT + NR++++ER+E E   W     +L + + D+D FK IND++G+ AGDK L I+A 
Sbjct: 489 PLTGLPNRAAWSERVEREMLDWQENGGHLAMAILDLDHFKRINDNYGHLAGDKVLKIVAD 548

Query: 428 TIKKELRDSDTVARFSGEEFILLLPERSDNESYQIIHQIQLNVSKLPFKFRDKSLTITLS 487
            ++K LR  D +ARF GEEF++LLP+ +   + Q+   ++  V   PF F+ + + IT S
Sbjct: 549 QLRKRLRGRDFIARFGGEEFVMLLPQTTPAVAAQVAEVLRATVEACPFHFKGERVVITTS 608

Query: 488 AASIRFMDSDTPETVLDRLNLTLSEAKHIGPSQL 521
                F   +  + VL R +  L  AK +G +++
Sbjct: 609 IGLGAFRSGERSDQVLKRADAALYRAKELGRNRV 642