Pairwise Alignments

Query, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

Subject, 925 a.a., DNA polymerase I from Pseudomonas simiae WCS417

 Score =  114 bits (284), Expect = 1e-29
 Identities = 86/263 (32%), Positives = 126/263 (47%), Gaps = 21/263 (7%)

Query: 29  LVIIDALNLIRRVHSAQPDPNDITRTAETTTRTLQRIINEAQP-------SHMIAVFDHH 81
           LV++D  + + R   A P    +T +    T  ++ ++N  +        S    VFD  
Sbjct: 6   LVLVDGSSYLYRAFHALPP---LTTSKGLPTGAVKGVLNMLKSLRKQYPNSPFAVVFD-- 60

Query: 82  LSDRGWRAELLPTYKANRKPMPDVLQQGIDAIQDAWWQLGIDSLLSEGDEADDLVATLAC 141
                +R E+   YKANR  MPD ++  I+ +  +   LG   L  EG EADD++ TLA 
Sbjct: 61  AKGGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR 120

Query: 142 KVAAHQEKVTIISTDKGYCQLLSPTLQIRDYFQQRWLDEPFIAQEFGVTPAQLTDYWGLT 201
             AA    V I + DK   QL+   + + +      +D   + ++FGV P Q+ DY  L 
Sbjct: 121 SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDYLALM 180

Query: 202 GVSSSQIPGVAGIGPKAAKEIL-NQFSSIEEAYAS----PELPAKYRK----KLDPHIEM 252
           G SS  IPGV GIGPK A  +L      I+E Y      P LP +  K    KL+ H EM
Sbjct: 181 GDSSDNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPSLPIRGAKTLPAKLEEHREM 240

Query: 253 ARICKQVSALKTDIELGFNLQDI 275
           A +  Q++ +K D+ L   L D+
Sbjct: 241 AFLSYQLATIKCDVPLDVGLDDL 263