Pairwise Alignments

Query, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

Subject, 932 a.a., DNA polymerase I (EC 2.7.7.7) from Sphingobium sp. HT1-2

 Score =  110 bits (276), Expect = 9e-29
 Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 12/258 (4%)

Query: 28  HLVIIDALNLIRRVHSAQP-------DPNDITRTAETTTRTLQRIINEAQ-PSHMIAVFD 79
           HL ++D    I R +   P        P        T    L   + +A+ P+H+  V D
Sbjct: 6   HLYLVDGSGYIFRAYHQLPPLTNQHGQPVGAVYGYTTMLWKLAEELGKAEGPTHLAVVLD 65

Query: 80  HHLSDRGWRAELLPTYKANRKPMPDVLQQGIDAIQDAWWQLGIDSLLSEGDEADDLVATL 139
                  +R ++   YKANR P P+ L      I+DA     +  +   G EADD++A+ 
Sbjct: 66  K--GSHTFRNDMYDQYKANRPPAPEDLVPQFPMIRDATRAFSLPCIEEAGFEADDIIASY 123

Query: 140 ACKVAAHQEKVTIISTDKGYCQLLSPTLQIRDYFQQRWLDEPFIAQEFGVTPAQLTDYWG 199
                     VTI+S+DK   QL+ P + + D  +       ++  +FGV P QL D   
Sbjct: 124 TQAAVRAGWHVTIVSSDKDLMQLIQPGVDMYDTMKNERRGADYVMGKFGVLPEQLGDVLA 183

Query: 200 LTGVSSSQIPGVAGIGPKAAKEILNQFSSIEEAY-ASPEL-PAKYRKKLDPHIEMARICK 257
           L G S   +PGV GIGPK A +++ ++ ++E A  A+P +  +K ++ L  H +MAR+ +
Sbjct: 184 LMGDSVDNVPGVPGIGPKTAAKLITEYGTLEAALDAAPSMKKSKMQENLIAHADMARLSR 243

Query: 258 QVSALKTDIELGFNLQDI 275
           ++ AL   ++L   L D+
Sbjct: 244 RLVALHDSMDLPEPLDDL 261