Pairwise Alignments

Query, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., DNA polymerase I (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  272 bits (695), Expect = 6e-78
 Identities = 135/253 (53%), Positives = 178/253 (70%), Gaps = 6/253 (2%)

Query: 25  MSLHLVIIDALNLIRRVHSAQPDPNDITRTAETTTRTLQRIINEAQPSHMIAVFDHHLSD 84
           ++ HL+I+DALNLIRR+H+ Q  P       ET    L ++I  +QP+H +AVFD     
Sbjct: 1   VAAHLLIVDALNLIRRIHAVQGSP-----CVETCQHALDQLIIHSQPTHAVAVFDDDARS 55

Query: 85  RGWRAELLPTYKANRKPMPDVLQQGIDAIQDAWWQLGIDSLLSEGDEADDLVATLACKVA 144
            GWR + LP YKA R PMPD L   + A++ A+ Q G+    S+G+EADDL ATLA KV 
Sbjct: 56  SGWRHQRLPDYKAGRPPMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVT 115

Query: 145 AHQEKVTIISTDKGYCQLLSPTLQIRDYFQQRWLDEPFIAQEFGVTPAQLTDYWGLTGVS 204
               + TI+STDKGYCQLLSP L+IRDYFQ+RWLD PFI +EFGV P QL DYWGL G+S
Sbjct: 116 EAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFGVLPRQLPDYWGLAGIS 175

Query: 205 SSQIPGVAGIGPKAAKEILNQFSSIEEAYAS-PELPAKYRKKLDPHIEMARICKQVSALK 263
           SS++PGVAGIGPK+A ++L QF ++E  YA   E+P K+RKKL+ H EMA +C+ ++ L+
Sbjct: 176 SSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEVPEKWRKKLETHKEMAFLCRDIARLQ 235

Query: 264 TDIELGFNLQDIR 276
           TD+ +  NLQ +R
Sbjct: 236 TDLHIDGNLQQLR 248