Pairwise Alignments

Query, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

Subject, 928 a.a., DNA polymerase I (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  114 bits (286), Expect = 6e-30
 Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 20/270 (7%)

Query: 29  LVIIDALNLIRRVHSAQPDPNDITRTAETTTRTLQRIIN-------EAQPSHMIAVFDHH 81
           L+++D  + + R + A P    +T +A   T  +  ++N       + QP+H   VFD  
Sbjct: 9   LILVDGSSYLYRAYHAFPP---LTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAVVFD-- 63

Query: 82  LSDRGWRAELLPTYKANRKPMPDVLQQGIDAIQDAWWQLGIDSLLSEGDEADDLVATLAC 141
              + +R EL   YK++R PMPD L+  I+ +      +G+  L   G EADD++ TLA 
Sbjct: 64  AKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAR 123

Query: 142 KVAAHQEKVTIISTDKGYCQLLSPTLQIRDYFQQRWLDEPFIAQEFGVTPAQLTDYWGLT 201
           +       V I + DK   QL++P + + +      L    +  ++GV P  + D+  L 
Sbjct: 124 EAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFLALM 183

Query: 202 GVSSSQIPGVAGIGPKAAKEILNQFSSIEEAYASPELPA--------KYRKKLDPHIEMA 253
           G SS  IPGV G+G K A+ +L     ++  YA PE  A            KL  + ++A
Sbjct: 184 GDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNKDVA 243

Query: 254 RICKQVSALKTDIELGFNLQDIRFNSSSAD 283
            +  +++ +KTD+EL    + +      AD
Sbjct: 244 YLSYKLATIKTDVELELTCEQLEVQQPIAD 273