Pairwise Alignments

Query, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., Ssb-binding protein, misidentified as ExoIX (RefSeq) from Escherichia coli BW25113

 Score =  268 bits (685), Expect = 9e-77
 Identities = 133/253 (52%), Positives = 178/253 (70%), Gaps = 6/253 (2%)

Query: 25  MSLHLVIIDALNLIRRVHSAQPDPNDITRTAETTTRTLQRIINEAQPSHMIAVFDHHLSD 84
           M++HL+I+DALNLIRR+H+ Q  P       ET    L ++I  +QP+H +AVFD     
Sbjct: 1   MAVHLLIVDALNLIRRIHAVQGSP-----CVETCQHALDQLIMHSQPTHAVAVFDDENRS 55

Query: 85  RGWRAELLPTYKANRKPMPDVLQQGIDAIQDAWWQLGIDSLLSEGDEADDLVATLACKVA 144
            GWR + LP YKA R PMP+ L   + A++ A+ Q G+    + G+EADDL ATLA KV 
Sbjct: 56  SGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVT 115

Query: 145 AHQEKVTIISTDKGYCQLLSPTLQIRDYFQQRWLDEPFIAQEFGVTPAQLTDYWGLTGVS 204
               + TI+STDKGYCQLLSPTL+IRDYFQ+RWLD PFI +EFGV P QL DYWGL G+S
Sbjct: 116 QAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGIS 175

Query: 205 SSQIPGVAGIGPKAAKEILNQFSSIEEAYASPELPA-KYRKKLDPHIEMARICKQVSALK 263
           SS++PGVAGIGPK+A ++L +F S+E  Y + +  A K+RKKL+ H EMA +C+ ++ L+
Sbjct: 176 SSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQ 235

Query: 264 TDIELGFNLQDIR 276
           TD+ +  NLQ +R
Sbjct: 236 TDLHIDGNLQQLR 248