Pairwise Alignments

Query, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., Ssb-binding protein, misidentified as ExoIX from Escherichia coli BL21

 Score =  270 bits (690), Expect = 3e-77
 Identities = 136/263 (51%), Positives = 184/263 (69%), Gaps = 8/263 (3%)

Query: 17  PYFLWF--LVMSLHLVIIDALNLIRRVHSAQPDPNDITRTAETTTRTLQRIINEAQPSHM 74
           PY L F  +++++HL+I+DALNLIRR+H+ Q  P       ET    L ++I  +QP+H 
Sbjct: 21  PYRLIFKGVIVAVHLLIVDALNLIRRIHAVQGSP-----CVETCQHALDQLIMHSQPTHA 75

Query: 75  IAVFDHHLSDRGWRAELLPTYKANRKPMPDVLQQGIDAIQDAWWQLGIDSLLSEGDEADD 134
           +AVFD      GWR + LP YKA R PMP+ L   + A++ A+ Q G+    + G+EADD
Sbjct: 76  VAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADD 135

Query: 135 LVATLACKVAAHQEKVTIISTDKGYCQLLSPTLQIRDYFQQRWLDEPFIAQEFGVTPAQL 194
           L ATLA KV     + TI+STDKGYCQLLSPTL+IRDYFQ+RWLD PFI +EFGV P QL
Sbjct: 136 LAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQL 195

Query: 195 TDYWGLTGVSSSQIPGVAGIGPKAAKEILNQFSSIEEAYASPELPA-KYRKKLDPHIEMA 253
            DYWGL G+SSS++PGVAGIGPK+A ++L +F S+E  Y + +  A K+RKKL+ H EMA
Sbjct: 196 PDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMA 255

Query: 254 RICKQVSALKTDIELGFNLQDIR 276
            +C+ ++ L+TD+ +  NLQ +R
Sbjct: 256 FLCRDIARLQTDLHIDGNLQQLR 278