Pairwise Alignments

Query, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  196 bits (499), Expect = 4e-55
 Identities = 124/297 (41%), Positives = 169/297 (56%), Gaps = 22/297 (7%)

Query: 3   RRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLL 62
           R+LPPL SL+ FEAAARH S   AA EL VT  A+SHQ++ LE+ LG+ LF R+ R L+L
Sbjct: 5   RQLPPLASLRAFEAAARHCSAKLAAHELSVTPTAISHQVRQLEDSLGVALFIRQPRQLVL 64

Query: 63  TEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPD 122
           T +G+     + + F+++A A  +L    ++ A+T+S  P+ A +WL+P +       P 
Sbjct: 65  TPQGRELQAVLGESFNAMANAVARLRAPPQRQAITLSAMPAVAARWLLPGVGALRALHPK 124

Query: 123 IDVRIKAVDMDEGSLTDDV--DVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180
           +D+RI A    E    D V  DVAI YG G WPG+ A+KL+     P CSPAL L     
Sbjct: 125 LDLRIHA--SHEAVALDGVTADVAIRYGHGRWPGMVAEKLFDNVFAPACSPALKL----- 177

Query: 181 EKLSDLAYHTLLHDT---SRK------DWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAA 231
           +K  DLA HTLLH T   SR       +W+Q A+  GLD   V+ GP+FS  T  + AA 
Sbjct: 178 KKRGDLARHTLLHFTVPGSRNQPGTWMEWQQAAQVAGLD---VSAGPVFSDETHTVSAAL 234

Query: 232 HGQGVALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWM 288
            GQGVAL +  L   E+ AG L+ PF   L     FY+VC E +     +A   +W+
Sbjct: 235 QGQGVALMSLALIADELRAGNLVKPFGPEL-PGLPFYLVCPEARRSEPAVAAVFEWV 290