Pairwise Alignments

Query, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  183 bits (465), Expect = 4e-51
 Identities = 108/291 (37%), Positives = 164/291 (56%), Gaps = 4/291 (1%)

Query: 1   MSRRL-PPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRS 59
           MS+RL P + +L+ FEAAARHLSFTRAAEEL +TQ+AVS Q+  LE+ L   LF R  R 
Sbjct: 1   MSKRLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRR 60

Query: 60  LLLTEEGQSYFLDIKDIFSSLAEATDKLLERSEK-GALTISLPPSFAIQWLVPRLADFNQ 118
           L LT  G  Y  ++  I + +  ++  +L   E+   L ++  PSF ++WL+P L  F +
Sbjct: 61  LQLTPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGK 120

Query: 119 QEPDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNK 178
           +  +I + I+        L    DV  +YG+G+WPG    +L++E ++P+C+P LL G K
Sbjct: 121 RHGNIHLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAGRK 180

Query: 179 PMEKLSDLAYHTLLHDTSRKD-WKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVA 237
            +    +LA   LL  TSR + W ++  E  L +V+  HGP F    M L AA  G GVA
Sbjct: 181 -LAGAEELAELVLLQSTSRPEAWHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQAGCGVA 239

Query: 238 LGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWM 288
           L    LA  E+  G L+ P++  + +  A Y+   E  A++ ++    +W+
Sbjct: 240 LVPRYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWI 290