Pairwise Alignments

Query, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., putative Transcriptional regulator AmpR from Pseudomonas putida KT2440

 Score =  186 bits (473), Expect = 4e-52
 Identities = 112/297 (37%), Positives = 168/297 (56%), Gaps = 15/297 (5%)

Query: 3   RRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLL 62
           + LPPLN L+ FE +AR+L+FT AAEEL +TQ AVS QI+ LE  LG+ LF+R  R L L
Sbjct: 4   KTLPPLNWLRAFEVSARYLNFTHAAEELHLTQGAVSQQIRHLESQLGVALFKRLPRGLGL 63

Query: 63  TEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPD 122
           TEEGQSY   ++D  S LA  T+++  + ++  L +    SF   WL PRLADF +  P 
Sbjct: 64  TEEGQSYLPVVQDAISRLAVGTNEIFGQRQRRPLKVRGSLSFLHFWLAPRLADFRRSHPQ 123

Query: 123 IDVR------IKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLG 176
           +D+R      +K +D ++       D+ I +G G W G+ A +L ++ L+P+C+PALL G
Sbjct: 124 VDIRYISNLWVKELDAED-------DLEIRWGSGQWAGVEAQRLTRDMLVPVCAPALLAG 176

Query: 177 NKPMEKLSDLAYHTLLHDTSRKD-WKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQG 235
             P+ +  DLA   LLH    ++ W  + +  G D V+ + G  F      L+ A  G G
Sbjct: 177 -CPLREPRDLARVPLLHVLGYEEGWGYWLERVGADQVDSSSGLQFDTLVSTLRMAELGLG 235

Query: 236 VALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKA 292
           VAL  + L +  +  GRL+APF + +  + +F++V    +A       F  W++  A
Sbjct: 236 VALARSSLVEDLLQEGRLVAPFAQRIEASESFFLVRGLGEALSPDAQAFSHWLVAMA 292