Pairwise Alignments

Query, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Gcv operon activator from Alteromonas macleodii MIT1002

 Score =  416 bits (1068), Expect = e-121
 Identities = 200/300 (66%), Positives = 246/300 (82%)

Query: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60
           M RRLPPLN+LK FEAAARHLSFT+AA+ELFVTQAAVSHQIKALE+FL +KLF RRNR+L
Sbjct: 1   MHRRLPPLNALKSFEAAARHLSFTKAADELFVTQAAVSHQIKALEDFLSMKLFLRRNRTL 60

Query: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120
           LLTEEGQ+YFL++KDIF +L +AT++LL +  KGA+T+++PPSFA QWLVPR+  F+   
Sbjct: 61  LLTEEGQAYFLELKDIFKNLQDATERLLAKGSKGAITVAMPPSFASQWLVPRIHKFSLAH 120

Query: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180
           PDIDVRIKAVD DEG L DDVDVAIYYG+G W GL+AD+L++EFL PLCSP L  G KP+
Sbjct: 121 PDIDVRIKAVDFDEGFLEDDVDVAIYYGKGRWAGLQADQLHREFLTPLCSPMLFQGPKPL 180

Query: 181 EKLSDLAYHTLLHDTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVALGN 240
             LSDL +H LLHD SR  WK + K  G+  VNVN GP+FSHS +VLQAAA GQG+ALGN
Sbjct: 181 SSLSDLRHHVLLHDLSRTAWKNWLKHVGVVGVNVNQGPVFSHSMLVLQAAALGQGIALGN 240

Query: 241 NVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKARSEQVDIL 300
            VLA+PEI+AGRL+ PF+E + + +AFY+VC E QA++G+IA FRDW+L    +EQ D+L
Sbjct: 241 TVLARPEIEAGRLVMPFEERVESRDAFYLVCEESQAELGKIAAFRDWILALVEAEQEDLL 300