Pairwise Alignments

Query, 483 a.a., tRNA 4-thiouridine(8) synthase ThiI from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., tRNA sulfurtransferase from Pseudomonas sp. DMC3

 Score =  414 bits (1063), Expect = e-120
 Identities = 222/485 (45%), Positives = 317/485 (65%), Gaps = 4/485 (0%)

Query: 1   MKFIVKPHPEIFVKSESVRKRFTKILESNIRIIVKARTQGVAVFNRRDHIEVTSNSDTYY 60
           MK IVK  PEI +KS  VR +F + L  NIR +++     V V    D++E+ +      
Sbjct: 1   MKLIVKVFPEITIKSRPVRTKFIRQLAKNIRTVLRDLDPAVVVNGVWDNLELETRVTDPK 60

Query: 61  A--EVLEILTTTPGIQQVLEVQQSSFTDLHNIYEQVLELNRANLENKTFVVRAKRRGKHD 118
           A  E+ E LT  PGI   L++ +    D  +I E+  +     L  K F VR KR GKH 
Sbjct: 61  ALKEMGERLTCMPGIAHFLQIDEYPLGDFDDITEKCKQHYGDALAGKIFSVRCKRAGKHA 120

Query: 119 FTSIELERYVGGGLNQAIASAKVKLINPDVTVQVEVVDELLNQVIARHKGLGGFPLGTQE 178
           F+S+++E+YVG  L +   +A + L  P + V++EV D+ L  + ++H G+GG+PLG  E
Sbjct: 121 FSSMDVEKYVGSKLRRECGAAGIDLKAPQIEVRIEVRDKRLFVIHSQHNGIGGYPLGALE 180

Query: 179 DVLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKVR 238
             L L+SGGFDS V++Y  ++RG   H+CFFNLGG AHE+GV + A+++W+KYGSS +V 
Sbjct: 181 QTLVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL 240

Query: 239 FIAIDFAPVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGIQALVTGEALGQVSSQTL 298
           F+++ F  V+ EIL K+D+  MGVVLKRM +R +  +AE+  I ALVTGEA+ QVSSQTL
Sbjct: 241 FVSVPFEEVLGEILGKVDNSHMGVVLKRMMLRASSEIAERLHIDALVTGEAISQVSSQTL 300

Query: 299 TNLRHIDNVTDTLILRPLINWDKEDIIRLAREIGTEDFAKTMPEFCGVISKSPTVKAVKE 358
            NL  ID VTD L+LRPLI   K+DII  A EIGT DFA+ MPE+CGVIS +P   A + 
Sbjct: 301 PNLSVIDCVTDKLVLRPLIVAHKQDIIDTANEIGTADFARHMPEYCGVISVNPKTAAKRG 360

Query: 359 KLEEEEAKFDFALLDQVVYNARQIDIRDIGKESLEKAPEVELVNSAEEGNAVVLDIRSPD 418
           ++E EE +FD A+L++ + NA+ + I D   + L +  ++E V+ A  G  +V+DIR PD
Sbjct: 361 RVEHEEKEFDMAVLERALANAKLVPI-DRVIDELGQDLQIEEVSEALAGQ-IVIDIRHPD 418

Query: 419 EEDESPLEIVGVEVKHLPFYKLATQFGDLDQSKTYLLYCSRGVMSRLQALYLQEQGFNNV 478
             ++ PLE+ G+EV+ +PFY +  +F +LD ++ YLLYC +GVMSRL A +L  +G  NV
Sbjct: 419 AAEDDPLELAGIEVQTMPFYAVNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANV 478

Query: 479 KVYRP 483
           +VYRP
Sbjct: 479 RVYRP 483