Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., flagellar motor protein MotD from Rhodanobacter sp000427505 FW510-R12

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 75/289 (25%), Positives = 126/289 (43%), Gaps = 33/289 (11%)

Query: 16  AWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKGTSII 75
           AW   +ADLM+LL+ FFV++ + S ++  KF+ ++ S+  AF   +R  +  +P  T I 
Sbjct: 14  AWAIPYADLMTLLLAFFVVMYAVSVVNEGKFRVMSESLIEAFNGSSR-AIAPLPP-TKIR 71

Query: 76  AQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDRAGGNQRDSGQLTGGQSAETSVQ 135
                P    P+      Q    I    +         +GG+ R++G             
Sbjct: 72  PHNIAPAIAAPSG-----QSGSSIVPIAVPIPPHPVPASGGSGREAG------------- 113

Query: 136 DNQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIRIREKGAF 195
                             E +  + + ++KAL   I++  + V +    ++I IR    F
Sbjct: 114 ------------HKAKPPETLGRIEDQVRKALQPLIDRKLVVVRHKPDWLEIEIRTDILF 161

Query: 196 PEGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVA 255
           P G A L      ++  +A ++      +RV G TD+  + + LY SNW+LSA RA SVA
Sbjct: 162 PSGVAQLSEPATEVLHDLAAILASFGNPLRVEGFTDDMPISNTLYPSNWELSAARAASVA 221

Query: 256 QEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISILQGDP 304
           + +         RL + G  +T+P+  N T   R  NRRV + ++   P
Sbjct: 222 R-LFSTSGIAPARLGIIGWGETRPIADNATVEGRNQNRRVVVVVMSDHP 269