Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., type VI secretion system protein TssL, long form from Variovorax sp. OAS795

 Score = 94.4 bits (233), Expect = 5e-24
 Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 1/140 (0%)

Query: 163 IKKALSREIEQGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPG 222
           +K+ LS EI +G + VE    Q  +  +    F  G A L PK  P++ ++A+ +  + G
Sbjct: 299 LKELLSAEIARGTVRVEEDDHQSAVTFKGDDMFVPGQARLNPKILPVLAKVADEINQVTG 358

Query: 223 KVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGP 282
            VR+TGH+DNQ + +  + +N  LS +RA + AQ ++  K     R++V G  DT PL  
Sbjct: 359 TVRITGHSDNQPIKTREFPNNQVLSEKRAAAAAQILQD-KGVAASRMKVEGRGDTAPLDD 417

Query: 283 NDTEAQRATNRRVEISILQG 302
             T A RA NRRV+I + QG
Sbjct: 418 GKTAAARARNRRVDIVVTQG 437