Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., Outer membrane porin, OmpA family from Sphingobium sp. HT1-2

 Score = 66.6 bits (161), Expect = 5e-16
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 164 KKALSREIEQGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPGK 223
           ++ L ++     ++V   G  + +R+     F    A +QP+FRP + +++ ++   P  
Sbjct: 85  ERKLRQQTAGSGVDVIRQGDDLLLRMPSGITFAFNDASVQPQFRPTLDEVSSILSQYPKT 144

Query: 224 -VRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGP 282
            + V GHTD+   D+     N  LS +RA SVA  +         R+  RG  +TQP+  
Sbjct: 145 YIDVYGHTDSDGSDAY----NQTLSERRAQSVAGYLTS-HGVQSARIATRGFGETQPIAS 199

Query: 283 NDTEAQRATNRRVEISILQGDPVYSDEVPS 312
           N TE  +A NRRVEI I    PV   +V S
Sbjct: 200 NATEEGKAANRRVEIKI---SPVTESDVRS 226