Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., membrane protein from Magnetospirillum magneticum AMB-1

 Score = 76.6 bits (187), Expect = 8e-19
 Identities = 74/306 (24%), Positives = 138/306 (45%), Gaps = 22/306 (7%)

Query: 16  AWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAG---------SMKFAFGVQNRLEVK 66
           AW   +AD ++ +M FF+LL     ++ +  +Q+ G         + K + G    L  K
Sbjct: 24  AWKVAYADFVTAMMAFFLLLWL---LNAVTEEQLTGVSNYFAPTMASKSSSGAGGLLGGK 80

Query: 67  DIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDRAGGNQRDSGQLTG 126
            I +G   ++    P   +  P   I     D+T       E E D + G  + +GQ  G
Sbjct: 81  VIGEGAQ-VSNTSSPSLVQHLPPASIGPGGEDLTGSKEFAPENEGDSSLGPGKGAGQGEG 139

Query: 127 ---GQSAETSVQDNQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQ 183
              GQ  + S    Q  +    Q++ Q   +  E +  ++K     +  QG++ V+N  +
Sbjct: 140 QGAGQGKDRSGMSEQEFKEAQAQREQQKFDKAKEVLEGAMKGIPEMKQFQGSMLVDNTPE 199

Query: 184 QIDIRIREK---GAFPEGSAFLQPKFRPLVRQIAELVKDIP-GKVRVTGHTDNQKLDSEL 239
            + I+I ++     FP GS+      R ++  ++ +V+ +P  ++ ++GHTD        
Sbjct: 200 GLRIQITDQEGLAMFPSGSSAPYGHTRAMLDLVSRVVRQLPDNRIAISGHTDAIPFRDPS 259

Query: 240 YRSNWDLSAQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISI 299
             +NW+LSA RA++  + +      +    ++ G AD +PL   D +  R  NRR+ I +
Sbjct: 260 GYTNWELSADRALATRRALIASGVPEGRIDRIVGRADQEPLDKADPKGLR--NRRISIIL 317

Query: 300 LQGDPV 305
           L+ + V
Sbjct: 318 LRENDV 323