Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., flagellar motor protein MotB from Magnetospirillum magneticum AMB-1

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 47/214 (21%)

Query: 129 SAETSVQDNQNTQSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIR 188
           +AE  + D    Q  +  +Q +A+ E++  VA ++  + +R+ EQ A ++ +LG+++++ 
Sbjct: 117 AAEKKISDEGRAQLALLSRQIEALKEELARVAAALDASETRDKEQKA-QISDLGKRLNVA 175

Query: 189 ----------------------------IREKG---------AFPEGSAFLQPKFRPLVR 211
                                       IR +G          F  GSA L  +    VR
Sbjct: 176 LAGKVEELQKYRSEFFGRLRKVLGDRPGIRIEGDRFVFQSELLFATGSAELGTEGAEQVR 235

Query: 212 QIAELVKDIPGKV--------RVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKD 263
           ++A  +++I   +        RV GHTD + + S  + SNW+LS  RA++V + +     
Sbjct: 236 KLAATIREINAGMPKGLNWVLRVDGHTDKRPITSGKFPSNWELSTARAITVLRAL-AADG 294

Query: 264 FDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEI 297
               RL   G  + QP+   +TEA  A NRR+EI
Sbjct: 295 VPRDRLAAAGFGEFQPVDSGNTEAAYAKNRRIEI 328