Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., Flagellar motor rotation protein MotB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 22/201 (10%)

Query: 115 GGNQ--RDSGQLTGG------QSAETSVQDN-QNTQSEMQQQQAQAMSEQMETVAESIKK 165
           GGN+       + GG      Q  E   Q N    +  M+Q +   +   ++ + ES  K
Sbjct: 73  GGNRIANSESPIPGGGDDYTQQQGEVEKQPNIDELKKRMEQSRLNKLRGDLDQLIESDPK 132

Query: 166 --ALSREIEQGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPGK 223
             AL   ++   ++ E L  QI I  + +  F  GSA ++P  R ++R IA ++  IP +
Sbjct: 133 LRALRPHLKIDLVQ-EGLRIQI-IDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNR 190

Query: 224 VRVTGHTDN-QKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPL-- 280
           + + GHTD+    + E   SNW+LSA RA +  +E+      +   L+V G+A T  L  
Sbjct: 191 ISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSD 250

Query: 281 -GPNDTEAQRATNRRVEISIL 300
            GP+D     A NRR+ + +L
Sbjct: 251 RGPDD-----AINRRISLLVL 266