Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., flagellar motor protein MotB from Erwinia tracheiphila SCR3

 Score = 67.4 bits (163), Expect = 5e-16
 Identities = 82/294 (27%), Positives = 126/294 (42%), Gaps = 50/294 (17%)

Query: 13  GLPAWLGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKGT 72
           G  +W   +AD M+ LM FF+++   S                             P   
Sbjct: 22  GHGSWKIAYADFMTALMAFFMVMWLISI--------------------------STPAQR 55

Query: 73  SIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFQEGESDRAGGNQRDSGQLTGGQSAET 132
             IA+ F+      TP+ V       IT  T    E  S   GG Q D  Q  G      
Sbjct: 56  ESIAEYFK------TPLKVA------ITGGT-RTSESVSVIPGGGQ-DPTQKIGEVH--- 98

Query: 133 SVQDNQNTQSEMQQQQAQAMSEQMETVAESIK--KALSREIEQGAIEVENLGQQIDIRIR 190
            V D    +  M + +   + E+++ + E+    KAL + +    +E E L  QI I  +
Sbjct: 99  KVVDMDAEKRNMDKIRLNRLREKLDQLIEADPRLKALRQHLIINMVE-EGLRIQI-IDSQ 156

Query: 191 EKGAFPEGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHTDN-QKLDSELYRSNWDLSAQ 249
            +  F  GSA ++P  R ++R IA ++ +IP K+ + GHTD+ Q    +   SNW+LS  
Sbjct: 157 NRPMFKTGSAEVEPYMRDILRAIAPILNNIPNKISLAGHTDDFQYATGDRGYSNWELSTD 216

Query: 250 RAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEISILQGD 303
           RA +  +E+          L+V G+ADT  L  N+  A  A NRR+ + +L  D
Sbjct: 217 RANASRRELVIGGLDAGKMLRVLGMADTMKL--NNRGANDAVNRRISLLVLNHD 268