Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., type IVB secretion system protein IcmH/DotU from Erwinia tracheiphila SCR3

 Score = 70.1 bits (170), Expect = 9e-17
 Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 2/157 (1%)

Query: 141 QSEMQQQQAQAMSEQMETVAESIKKALSREIEQGAIEVENLGQQIDIRIREKGAFPEGSA 200
           Q+ + + +A       +T+ + I+K L   I    ++V +      + I     F E   
Sbjct: 235 QTPLPKTEASKSMRSSQTLLD-IRKRLDDLIASHQLDVSDESSGSVVIIAADKLFSEDGT 293

Query: 201 FLQPKFRPLVRQIAELVKDIPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEK 260
            L P+ R ++ +++  + DIPG + V   TD++ L +  Y SN+D S  RA +V+  M  
Sbjct: 294 DLTPQGRAIITRVSAALDDIPGMILVRSFTDDRPLHASYYTSNYDFSLARARNVSALMIH 353

Query: 261 VKDFDHLRLQVRGLADTQPLGPNDTEAQRATNRRVEI 297
           ++   H+ ++  G  D+  L PND++  RA NRRVEI
Sbjct: 354 LQKPLHV-IRSEGRGDSNQLLPNDSDENRAQNRRVEI 389