Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., DotU family type VI secretion system protein from Erwinia tracheiphila SCR3

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 45/145 (31%), Positives = 85/145 (58%), Gaps = 9/145 (6%)

Query: 160 AESIKKALSREIEQGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKD 219
           A ++K  L  EIEQG + V++   Q  + ++  G F  GS  ++ ++  ++ ++A+ + +
Sbjct: 256 ALNLKGFLHPEIEQGLVSVKDEADQSVVTLKGDGLFTSGSTAVRGRYEAVLDRVAQAMNN 315

Query: 220 IPGKVRVTGHTDNQKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHL----RLQVRGLA 275
           + G++ V G++DN  + S  + SN++LS  RA SV + +++     HL    R++  G  
Sbjct: 316 VSGRILVIGYSDNVPIRSARFASNYELSLARAQSVQERLQQ-----HLSQPQRVKAEGRG 370

Query: 276 DTQPLGPNDTEAQRATNRRVEISIL 300
           ++ PL PN +   RA NRRV+I++L
Sbjct: 371 ESNPLVPNTSAENRARNRRVDITLL 395