Pairwise Alignments

Query, 318 a.a., flagellar motor protein MotB from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 57.8 bits (138), Expect = 5e-13
 Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 8/139 (5%)

Query: 167 LSREIEQGAIEV-ENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPGKVR 225
           L+ EI  GA+EV       + IRI     F  GS  ++ + R +V ++ + +   PG V 
Sbjct: 307 LAPEIRTGAVEVLAGEDGALVIRIPAAAMFATGSDAVKARHRAIVERVGQTLAVEPGSVL 366

Query: 226 VTGHTDNQKLDSELYRSNWDLSAQ-----RAVSVAQEMEKVKDFDHLRLQVRGLADTQPL 280
           V  HTD+Q        +   L+AQ     RA +V + +E  +     RL   G  D +P+
Sbjct: 367 VVAHTDDQTPPGGRPPAAQSLTAQSLTDARAEAVRKLLE--RSLPPARLSAEGHGDQEPV 424

Query: 281 GPNDTEAQRATNRRVEISI 299
             NDT A R  NRR++I +
Sbjct: 425 ALNDTPAGRDANRRIDIRL 443